Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BS16045_RS00245 | Genome accession | NZ_CP017112 |
| Coordinates | 44451..44741 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain BS16045 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39451..49741
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS16045_RS00205 (BS16045_00040) | darA | 39474..39803 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| BS16045_RS00210 (BS16045_00041) | yaaR | 39816..40256 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| BS16045_RS00215 (BS16045_00042) | holB | 40268..41257 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| BS16045_RS00220 (BS16045_00043) | ricT | 41260..42087 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| BS16045_RS00225 (BS16045_00044) | yabA | 42102..42461 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| BS16045_RS00230 (BS16045_00045) | trmNF | 42520..43263 (+) | 744 | WP_015253014.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BS16045_RS00235 (BS16045_00046) | yazA | 43250..43549 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| BS16045_RS00240 (BS16045_00047) | rsmI | 43524..44402 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BS16045_RS00245 (BS16045_00048) | abrB | 44451..44741 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BS16045_RS00250 (BS16045_00049) | metG | 45236..47230 (+) | 1995 | WP_015253011.1 | methionine--tRNA ligase | - |
| BS16045_RS00255 (BS16045_00050) | dayD | 47309..48076 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| BS16045_RS00260 (BS16045_00051) | yabE | 48232..49545 (+) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=195658 BS16045_RS00245 WP_003226760.1 44451..44741(-) (abrB) [Bacillus subtilis strain BS16045]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=195658 BS16045_RS00245 WP_003226760.1 44451..44741(-) (abrB) [Bacillus subtilis strain BS16045]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |