Detailed information NTG0195553

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AM361_RS12645
• Genome accession: NZ_CP021732
• Coordinates: 2434787..2435812 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain AR_0114
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2429787..2440812

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM361_RS12625 (AM361_12585)	metJ	2430848..2431165 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AM361_RS12630 (AM361_12590)	yiiX	2431349..2431957 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AM361_RS12635 (AM361_12595)	rpmE	2432018..2432230 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AM361_RS12640 (AM361_12600)	priA	2432433..2434631 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
AM361_RS12645 (AM361_12605)	cytR	2434787..2435812 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AM361_RS12650 (AM361_12610)	ftsN	2435904..2436863 (+)	960	WP_000068828.1	cell division protein FtsN	-
AM361_RS12655 (AM361_12615)	hslV	2436956..2437486 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AM361_RS12660 (AM361_12620)	hslU	2437496..2438827 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AM361_RS12665 (AM361_12625)	menA	2438894..2439820 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AM361_RS12670 (AM361_12630)	rraA	2439913..2440398 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AM361_RS12675 (AM361_12635)	zapB	2440483..2440728 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=195553 AM361_RS12645 WP_000644904.1 2434787..2435812(+) (cytR) [Escherichia coli strain AR_0114]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=195553 AM361_RS12645 WP_000644904.1 2434787..2435812(+) (cytR) [Escherichia coli strain AR_0114]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628