Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   EnteroDNA1_RS21445 Genome accession   NZ_CP017087
Coordinates   4533228..4533854 (+) Length   208 a.a.
NCBI ID   WP_033145121.1    Uniprot ID   A0A263VSI0
Organism   Enterobacter sp. HK169     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4528228..4538854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EnteroDNA1_RS21425 (EnteroDNA1_04244) - 4528628..4530388 (-) 1761 WP_069303897.1 Lon protease family protein -
  EnteroDNA1_RS21430 (EnteroDNA1_04245) matP 4530575..4531027 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  EnteroDNA1_RS21435 (EnteroDNA1_04246) ompA 4531091..4532146 (-) 1056 WP_023311028.1 porin OmpA -
  EnteroDNA1_RS21440 (EnteroDNA1_04247) sulA 4532501..4533010 (-) 510 WP_033145120.1 SOS-induced cell division inhibitor SulA -
  EnteroDNA1_RS21445 (EnteroDNA1_04248) sxy/tfoX 4533228..4533854 (+) 627 WP_033145121.1 TfoX/Sxy family DNA transformation protein Regulator
  EnteroDNA1_RS21450 (EnteroDNA1_04249) yccS 4533811..4535973 (-) 2163 WP_033145122.1 YccS family putative transporter -
  EnteroDNA1_RS21455 (EnteroDNA1_04250) - 4535993..4536439 (-) 447 WP_032649128.1 YccF domain-containing protein -
  EnteroDNA1_RS21460 (EnteroDNA1_04251) helD 4536563..4538617 (+) 2055 WP_069303898.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23876.44 Da        Isoelectric Point: 9.4588

>NTDB_id=195370 EnteroDNA1_RS21445 WP_033145121.1 4533228..4533854(+) (sxy/tfoX) [Enterobacter sp. HK169]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=195370 EnteroDNA1_RS21445 WP_033145121.1 4533228..4533854(+) (sxy/tfoX) [Enterobacter sp. HK169]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGAGAGCGGCTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAGGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A263VSI0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment