Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABE28_RS21950 Genome accession   NZ_CP017080
Coordinates   4506514..4507464 (-) Length   316 a.a.
NCBI ID   WP_064467260.1    Uniprot ID   A0A1B3XUX6
Organism   Peribacillus muralis strain G25-68     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4501514..4512464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABE28_RS21935 (ABE28_021935) - 4503666..4504610 (-) 945 WP_180320025.1 siderophore ABC transporter substrate-binding protein -
  ABE28_RS21940 (ABE28_021940) - 4504822..4505580 (-) 759 WP_064467262.1 ABC transporter ATP-binding protein -
  ABE28_RS21945 (ABE28_021945) - 4505574..4506521 (-) 948 WP_064467261.1 iron chelate uptake ABC transporter family permease subunit -
  ABE28_RS21950 (ABE28_021950) ceuB 4506514..4507464 (-) 951 WP_064467260.1 ABC transporter permease Machinery gene
  ABE28_RS21955 (ABE28_021955) - 4507793..4508065 (+) 273 WP_167353420.1 DUF1450 domain-containing protein -
  ABE28_RS25340 - 4508066..4508206 (+) 141 WP_156775881.1 hypothetical protein -
  ABE28_RS21960 (ABE28_021960) - 4508324..4509979 (+) 1656 WP_257390662.1 M14 family metallocarboxypeptidase -
  ABE28_RS21965 (ABE28_021965) shc 4510108..4512003 (+) 1896 WP_064467258.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34912.16 Da        Isoelectric Point: 9.5025

>NTDB_id=195297 ABE28_RS21950 WP_064467260.1 4506514..4507464(-) (ceuB) [Peribacillus muralis strain G25-68]
MKLRYLVISLVILSFTSLFIGVKDITPLDLLDLSDDKVQIMLQSRFPRMVTIIIAGVVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLALIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYVSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKFVVNFGLVIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRIIIYPFEIPIGLVVGVIGSAIFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=195297 ABE28_RS21950 WP_064467260.1 4506514..4507464(-) (ceuB) [Peribacillus muralis strain G25-68]
ATGAAGTTAAGATATTTAGTTATTTCTTTAGTCATATTGTCCTTTACTTCACTGTTCATTGGCGTGAAGGATATCACCCC
CCTCGATTTATTGGACTTATCCGATGATAAAGTGCAAATCATGCTCCAAAGCCGCTTTCCCAGAATGGTGACCATTATCA
TTGCCGGAGTGGTGATGAGCATAAGCGGACTGATCATGCAGCAGCTGAGCCGCAATAAATTTGTATCTCCTACGACTGCA
GGTACGATGGATTCTGCAAGGCTCGGCCTTCTTCTTGCCCTTATCATCTTTCCATCAGCCGCCCTTATCGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCCTGTTCATGAAAATCCTTGATCAAGTTAAATATAAGGACACGATTT
TCATTCCATTGGTCGGCCTGATGTTCGGCAACATCGTCGGATCGATCTCGACATTCTTCGCTTATAAATATGACTTGATC
CAAAGCCTCAACACCTGGATGAATGGTGACTTCTCGATGATCATGTCGGGGAGGTACGAACTTATATACGTTAGTATCCC
ATTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACGGTTGCAGGAATGGGTGAGGAATTTGCCATCAACCTGGGGC
TCAATTATAAATTCGTCGTCAACTTCGGCTTGGTCATTGTGGCCTTATCCTCGACTGTCGTTTTGCTGACGGTGGGGACC
ATACCTTTCATAGGCTTGATCGTACCGAATATCGTATCCCTCTACCTTGGTGATAATTTGAAAAAGAGCCTTTCTCATAC
AGCTTTGCTAGGGGCCGTGTTCCTATTGATCTGCGATATATTGGGCAGGATCATCATCTATCCATTCGAAATCCCGATCG
GTCTTGTGGTGGGTGTGATAGGAAGCGCCATATTCATCTATCTGATATTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1B3XUX6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.633

100

0.506

Multiple sequence alignment