Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   ABE28_RS14910 Genome accession   NZ_CP017080
Coordinates   3075799..3077514 (-) Length   571 a.a.
NCBI ID   WP_064463266.1    Uniprot ID   A0A1B3XQZ5
Organism   Peribacillus muralis strain G25-68     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3070799..3082514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABE28_RS14895 (ABE28_014895) - 3071268..3072845 (-) 1578 WP_064463262.1 DUF342 domain-containing protein -
  ABE28_RS14900 (ABE28_014900) spo0A 3073201..3073992 (-) 792 WP_034308269.1 sporulation transcription factor Spo0A -
  ABE28_RS14905 (ABE28_014905) spoIVB 3074335..3075627 (-) 1293 WP_064463264.1 SpoIVB peptidase -
  ABE28_RS14910 (ABE28_014910) recN 3075799..3077514 (-) 1716 WP_064463266.1 DNA repair protein RecN Machinery gene
  ABE28_RS14915 (ABE28_014915) ahrC 3077537..3077986 (-) 450 WP_064463268.1 transcriptional regulator AhrC/ArgR -
  ABE28_RS14920 (ABE28_014920) - 3078267..3079094 (-) 828 WP_064463270.1 TlyA family RNA methyltransferase -
  ABE28_RS14925 (ABE28_014925) dxs 3079099..3080991 (-) 1893 WP_064463272.1 1-deoxy-D-xylulose-5-phosphate synthase -
  ABE28_RS14930 (ABE28_014930) - 3081247..3082140 (-) 894 WP_064463274.1 polyprenyl synthetase family protein -
  ABE28_RS14935 (ABE28_014935) - 3082142..3082375 (-) 234 WP_064463276.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 571 a.a.        Molecular weight: 64477.41 Da        Isoelectric Point: 5.1503

>NTDB_id=195280 ABE28_RS14910 WP_064463266.1 3075799..3077514(-) (recN) [Peribacillus muralis strain G25-68]
MLTELSIRNFAIIDSLSVSFEKGLTVLTGETGAGKSIIIDAVHLLVGGRGSSEFIRHGESKAEIEGLFQIDDEKHPVFAK
AEEFGLDMNDGMAILRRDISLSGKSVCRVNGKLVTIAILREIGRTLIDIHGQHEHQELMDERLHLPLLDQFGGEKIASAL
TEYQKLYKRYEFASKQLNDLSQNEQQMVHRLDLIQFQFDEIQKADLKFQEDEELMEERKKINNFEKIHEALQTSYNALNG
EQHAIDWLSVAMNNMEEAAGLDEGLRASSEVVSNSYFLLEEAVSNIRDQLDSLDYDTERVEFIEGRLNEINQLKRKYGRS
IEEILEYGAGIEEEVEKLLNRETHIAKLEKEMKSIKADLIVEAKNLSELRQAFARQLTKKIHQELKDLYMEKTIFEPHFH
QTAYTFDELSDRGINQSGLDSMEFYISTNPGEPLKPLSKIASGGELSRIMLALKSIFSKHQGITSIIFDEVDTGVSGRVA
QSIAEKIYKVATGSQVLCISHLPQVAAMADTHLFIAKNVRAGRTNTSVKPLIETEKIKEIGRMISGVEITDLTKQHASEL
IQLAKRLKITS

Nucleotide


Download         Length: 1716 bp        

>NTDB_id=195280 ABE28_RS14910 WP_064463266.1 3075799..3077514(-) (recN) [Peribacillus muralis strain G25-68]
TTGTTAACAGAACTATCGATAAGAAATTTTGCGATCATAGATAGCCTCTCCGTTTCGTTCGAGAAAGGCTTGACTGTCTT
GACCGGGGAAACAGGGGCAGGTAAATCAATTATTATAGATGCTGTCCATCTTCTGGTTGGGGGGCGCGGTTCCTCGGAAT
TTATTCGGCATGGTGAGTCAAAGGCGGAGATAGAAGGTTTATTTCAAATCGATGATGAAAAACATCCGGTCTTTGCCAAG
GCCGAAGAATTTGGTCTGGACATGAATGATGGTATGGCCATTCTTAGAAGAGACATTTCGCTCAGTGGAAAAAGCGTATG
CCGAGTTAATGGAAAACTCGTAACGATCGCTATTTTACGGGAGATAGGACGGACATTGATTGATATCCATGGCCAGCATG
AGCATCAGGAATTAATGGACGAAAGGCTTCATCTGCCGCTGCTGGACCAATTTGGCGGTGAAAAAATCGCATCGGCGCTT
ACGGAATACCAAAAACTATATAAACGCTATGAATTCGCTTCGAAGCAATTGAATGATTTAAGTCAAAACGAGCAACAAAT
GGTCCACCGCCTTGACTTGATCCAATTTCAATTCGATGAAATCCAAAAAGCTGATTTGAAATTTCAAGAAGATGAAGAAT
TGATGGAAGAACGGAAGAAAATTAATAATTTCGAAAAAATTCATGAAGCGCTGCAAACGAGCTACAATGCCTTAAATGGT
GAACAGCATGCAATCGATTGGCTATCGGTAGCCATGAATAACATGGAAGAGGCGGCAGGCCTTGATGAGGGGTTAAGAGC
AAGCTCGGAGGTCGTCTCCAATAGTTACTTTCTGCTTGAAGAAGCCGTGTCTAACATTCGAGATCAATTGGATTCCTTGG
ATTATGATACGGAGCGTGTCGAATTCATTGAGGGCCGCCTTAACGAAATAAATCAATTGAAACGTAAATACGGTCGTTCC
ATCGAGGAAATTCTCGAATATGGTGCCGGCATCGAAGAGGAAGTCGAAAAACTCCTGAACAGGGAAACGCACATAGCGAA
GCTTGAAAAGGAAATGAAATCGATTAAGGCCGATTTAATCGTCGAAGCAAAGAACCTGTCAGAATTAAGGCAGGCATTCG
CTCGGCAGCTTACAAAAAAAATTCATCAGGAATTAAAAGATTTATACATGGAAAAAACAATTTTCGAGCCTCATTTCCAT
CAAACTGCATATACGTTCGATGAATTGTCAGATAGAGGCATAAATCAGTCCGGTTTGGATTCCATGGAATTTTATATTTC
CACGAATCCAGGCGAACCGTTAAAACCACTTTCCAAAATTGCCTCGGGCGGAGAGCTGTCGCGGATCATGCTGGCGCTGA
AAAGCATTTTTTCCAAGCATCAAGGCATTACCTCCATCATTTTTGATGAAGTGGACACAGGTGTCAGCGGGCGGGTTGCC
CAATCCATTGCCGAGAAGATTTATAAAGTGGCAACGGGATCTCAAGTTTTGTGCATCTCCCATTTGCCGCAGGTCGCGGC
TATGGCGGATACCCATTTATTCATTGCAAAAAATGTCAGGGCAGGACGCACCAATACCTCCGTCAAGCCTCTGATAGAAA
CCGAAAAAATAAAAGAAATTGGCAGGATGATTTCAGGAGTCGAGATTACCGATTTAACGAAGCAGCATGCCAGTGAGCTA
ATACAGCTCGCCAAAAGGCTGAAAATCACTTCTTGA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-233)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1B3XQZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

60.243

100

0.608

Multiple sequence alignment