Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   BGM23_RS22270 Genome accession   NZ_CP017072
Coordinates   3881642..3881782 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus sp. FJAT-14266     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3876642..3886782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGM23_RS22265 - 3880524..3881696 (-) 1173 Protein_3903 condensation domain-containing protein -
  BGM23_RS22270 comS 3881642..3881782 (-) 141 WP_010886404.1 competence protein ComS Regulator
  BGM23_RS22275 srfAB 3881874..3884915 (-) 3042 Protein_3905 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=195231 BGM23_RS22270 WP_010886404.1 3881642..3881782(-) (comS) [Bacillus sp. FJAT-14266]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=195231 BGM23_RS22270 WP_010886404.1 3881642..3881782(-) (comS) [Bacillus sp. FJAT-14266]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment