Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | BGM23_RS20145 | Genome accession | NZ_CP017072 |
| Coordinates | 3900054..3900503 (+) | Length | 149 a.a. |
| NCBI ID | WP_003234608.1 | Uniprot ID | A0A8E0S750 |
| Organism | Bacillus sp. FJAT-14266 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 3895054..3905503
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGM23_RS20125 (BGM23_20125) | hxlR | 3896264..3896626 (-) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
| BGM23_RS20130 (BGM23_20130) | hxlA | 3896859..3897491 (+) | 633 | WP_003234604.1 | 3-hexulose-6-phosphate synthase | - |
| BGM23_RS20135 (BGM23_20135) | hxlB | 3897497..3898054 (+) | 558 | WP_003234605.1 | 6-phospho-3-hexuloisomerase | - |
| BGM23_RS20140 (BGM23_20140) | tlpC | 3898165..3899886 (+) | 1722 | WP_029727077.1 | methyl-accepting chemotaxis protein TlpC | - |
| BGM23_RS20145 (BGM23_20145) | nucA/comI | 3900054..3900503 (+) | 450 | WP_003234608.1 | DNA-entry nuclease | Machinery gene |
| BGM23_RS20150 (BGM23_20150) | nin/comJ | 3900530..3900928 (+) | 399 | WP_015715226.1 | DNA-entry nuclease inhibitor | Regulator |
| BGM23_RS20155 (BGM23_20155) | bglC | 3900965..3902398 (-) | 1434 | WP_029727076.1 | 6-phospho-beta-glucosidase | - |
| BGM23_RS20160 (BGM23_20160) | - | 3902550..3902882 (-) | 333 | WP_015252849.1 | YckD family protein | - |
| BGM23_RS20165 (BGM23_20165) | - | 3902964..3903419 (-) | 456 | WP_029727075.1 | RDD family protein | - |
| BGM23_RS21960 | - | 3903438..3903635 (-) | 198 | WP_119122841.1 | hypothetical protein | - |
| BGM23_RS20175 (BGM23_20175) | - | 3903797..3904660 (+) | 864 | WP_029727074.1 | transporter substrate-binding domain-containing protein | - |
| BGM23_RS20180 (BGM23_20180) | - | 3904670..3905350 (+) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16470.42 Da Isoelectric Point: 4.5282
>NTDB_id=195228 BGM23_RS20145 WP_003234608.1 3900054..3900503(+) (nucA/comI) [Bacillus sp. FJAT-14266]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSTDQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSTDQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=195228 BGM23_RS20145 WP_003234608.1 3900054..3900503(+) (nucA/comI) [Bacillus sp. FJAT-14266]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTTTCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGACACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTTTCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGACACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
97.987 |
100 |
0.98 |