Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BGM23_RS17500 Genome accession   NZ_CP017072
Coordinates   3365460..3366254 (-) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus sp. FJAT-14266     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3360460..3371254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGM23_RS17460 (BGM23_17460) ephM 3361303..3362163 (-) 861 WP_029726839.1 epoxide hydrolase EphM -
  BGM23_RS17465 (BGM23_17465) spdL 3362165..3362482 (-) 318 WP_032679045.1 SdpC immunity protein SpdL -
  BGM23_RS17470 (BGM23_17470) - 3362567..3363085 (-) 519 WP_029726841.1 SH3 domain-containing protein -
  BGM23_RS17475 (BGM23_17475) - 3363230..3363499 (-) 270 WP_003243789.1 YfhJ family protein -
  BGM23_RS17480 (BGM23_17480) - 3363624..3363776 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  BGM23_RS17485 (BGM23_17485) - 3363808..3365001 (-) 1194 WP_072692836.1 MFS transporter -
  BGM23_RS17495 (BGM23_17495) - 3365138..3365458 (-) 321 WP_029726843.1 YfhH family protein -
  BGM23_RS17500 (BGM23_17500) recX 3365460..3366254 (-) 795 WP_029726844.1 recombination regulator RecX Regulator
  BGM23_RS17505 (BGM23_17505) - 3366343..3367254 (+) 912 WP_029726845.1 TIGR01777 family oxidoreductase -
  BGM23_RS17510 (BGM23_17510) - 3367309..3367419 (+) 111 WP_003223230.1 YfhE family protein -
  BGM23_RS17515 (BGM23_17515) - 3367486..3367677 (+) 192 WP_003233561.1 YfhD family protein -
  BGM23_RS17520 (BGM23_17520) - 3367716..3368300 (-) 585 WP_003243940.1 nitroreductase -
  BGM23_RS17525 (BGM23_17525) - 3368388..3369269 (-) 882 WP_046664314.1 PhzF family phenazine biosynthesis isomerase -
  BGM23_RS17530 (BGM23_17530) - 3369384..3370415 (-) 1032 WP_046664315.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=195218 BGM23_RS17500 WP_029726844.1 3365460..3366254(-) (recX) [Bacillus sp. FJAT-14266]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=195218 BGM23_RS17500 WP_029726844.1 3365460..3366254(-) (recX) [Bacillus sp. FJAT-14266]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment