Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BGM23_RS15975 Genome accession   NZ_CP017072
Coordinates   3084145..3084336 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus sp. FJAT-14266     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3079145..3089336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGM23_RS15950 (BGM23_15950) appD 3079470..3080456 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  BGM23_RS15955 (BGM23_15955) - 3080648..3081433 (-) 786 WP_003232967.1 DUF2268 domain-containing protein -
  BGM23_RS15960 (BGM23_15960) fabF 3081509..3082750 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  BGM23_RS15965 (BGM23_15965) fabH 3082773..3083711 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  BGM23_RS15970 (BGM23_15970) yjzB 3083876..3084115 (+) 240 WP_003232972.1 spore coat protein YjzB -
  BGM23_RS15975 (BGM23_15975) comZ 3084145..3084336 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  BGM23_RS15980 (BGM23_15980) med 3084351..3085304 (-) 954 WP_003245494.1 transcriptional regulator Med Regulator
  BGM23_RS15985 (BGM23_15985) - 3085395..3085952 (-) 558 WP_003232974.1 hypothetical protein -
  BGM23_RS15990 (BGM23_15990) - 3086034..3086768 (-) 735 WP_003245223.1 hypothetical protein -
  BGM23_RS15995 (BGM23_15995) - 3087017..3087202 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  BGM23_RS16000 (BGM23_16000) - 3087248..3087427 (-) 180 WP_003245356.1 YjzC family protein -
  BGM23_RS16005 (BGM23_16005) argF 3087513..3088472 (-) 960 WP_003232980.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=195210 BGM23_RS15975 WP_003224559.1 3084145..3084336(-) (comZ) [Bacillus sp. FJAT-14266]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=195210 BGM23_RS15975 WP_003224559.1 3084145..3084336(-) (comZ) [Bacillus sp. FJAT-14266]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment