Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   BGM23_RS15865 Genome accession   NZ_CP017072
Coordinates   3060895..3062016 (-) Length   373 a.a.
NCBI ID   WP_003232938.1    Uniprot ID   -
Organism   Bacillus sp. FJAT-14266     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 3055895..3067016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGM23_RS15835 (BGM23_15835) cwlQ 3056033..3056767 (+) 735 WP_029726274.1 bifunctional muramidase/murein lytic transglycosylase -
  BGM23_RS15840 (BGM23_15840) - 3057022..3057420 (+) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  BGM23_RS15845 (BGM23_15845) spxH 3057417..3058316 (+) 900 WP_003245184.1 protease adaptor protein SpxH -
  BGM23_RS15855 (BGM23_15855) - 3058631..3058798 (+) 168 WP_003244944.1 hypothetical protein -
  BGM23_RS15860 (BGM23_15860) pepF 3058836..3060665 (-) 1830 WP_003245178.1 oligoendopeptidase F -
  BGM23_RS15865 (BGM23_15865) coiA 3060895..3062016 (-) 1122 WP_003232938.1 competence protein CoiA Machinery gene
  BGM23_RS21935 - 3062090..3062212 (+) 123 WP_003245684.1 hypothetical protein -
  BGM23_RS15870 (BGM23_15870) mecA 3062207..3062863 (-) 657 WP_015383354.1 adaptor protein MecA Regulator
  BGM23_RS21940 - 3062830..3062970 (-) 141 WP_119122854.1 hypothetical protein -
  BGM23_RS15875 (BGM23_15875) - 3063139..3063795 (+) 657 WP_003232944.1 TerC family protein -
  BGM23_RS15880 (BGM23_15880) spx 3063838..3064233 (-) 396 WP_014476435.1 transcriptional regulator Spx -
  BGM23_RS15885 (BGM23_15885) - 3064413..3064991 (-) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  BGM23_RS15890 (BGM23_15890) - 3065156..3066373 (-) 1218 WP_010886478.1 MFS transporter -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43735.78 Da        Isoelectric Point: 10.1187

>NTDB_id=195206 BGM23_RS15865 WP_003232938.1 3060895..3062016(-) (coiA) [Bacillus sp. FJAT-14266]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=195206 BGM23_RS15865 WP_003232938.1 3060895..3062016(-) (coiA) [Bacillus sp. FJAT-14266]
CTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

99.196

100

0.992


Multiple sequence alignment