Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BGM23_RS14470 Genome accession   NZ_CP017072
Coordinates   2813628..2814092 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus sp. FJAT-14266     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2808628..2819092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGM23_RS14450 (BGM23_14450) fadH 2809818..2810582 (-) 765 WP_029727009.1 2,4-dienoyl-CoA reductase -
  BGM23_RS14455 (BGM23_14455) - 2810725..2811588 (+) 864 WP_029727008.1 metallophosphoesterase -
  BGM23_RS14460 (BGM23_14460) - 2811640..2812134 (+) 495 WP_072174092.1 L,D-transpeptidase family protein -
  BGM23_RS14465 (BGM23_14465) - 2812210..2813502 (+) 1293 WP_029727007.1 MFS transporter -
  BGM23_RS14470 (BGM23_14470) kre 2813628..2814092 (+) 465 WP_003232406.1 YkyB family protein Regulator
  BGM23_RS14475 (BGM23_14475) cheV 2814136..2815047 (-) 912 WP_029727006.1 chemotaxis protein CheV -
  BGM23_RS14480 (BGM23_14480) - 2815251..2815412 (+) 162 WP_003245246.1 hypothetical protein -
  BGM23_RS14485 (BGM23_14485) - 2815614..2816795 (+) 1182 WP_014476653.1 aminotransferase A -
  BGM23_RS14490 (BGM23_14490) kinA 2816805..2818625 (-) 1821 WP_015252197.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=195202 BGM23_RS14470 WP_003232406.1 2813628..2814092(+) (kre) [Bacillus sp. FJAT-14266]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=195202 BGM23_RS14470 WP_003232406.1 2813628..2814092(+) (kre) [Bacillus sp. FJAT-14266]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment