Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BGM23_RS14365 Genome accession   NZ_CP017072
Coordinates   2797642..2798217 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus sp. FJAT-14266     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2792642..2803217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGM23_RS14340 (BGM23_14340) mobB 2793038..2793559 (-) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  BGM23_RS14345 (BGM23_14345) glp 2793520..2794812 (-) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  BGM23_RS14350 (BGM23_14350) - 2794830..2795849 (-) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  BGM23_RS14355 (BGM23_14355) - 2795900..2796499 (-) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  BGM23_RS14360 (BGM23_14360) cse15 2796636..2797601 (+) 966 WP_029727015.1 spore protein Cse15 -
  BGM23_RS14365 (BGM23_14365) rok 2797642..2798217 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  BGM23_RS14370 (BGM23_14370) ykuV 2798683..2799129 (-) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  BGM23_RS14375 (BGM23_14375) ahpA 2799201..2799743 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  BGM23_RS14380 (BGM23_14380) mscT 2799980..2800783 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  BGM23_RS14385 (BGM23_14385) - 2800820..2801065 (-) 246 WP_003232382.1 YkuS family protein -
  BGM23_RS14390 (BGM23_14390) - 2801127..2802251 (-) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  BGM23_RS14395 (BGM23_14395) dapD 2802321..2803031 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=195201 BGM23_RS14365 WP_003232378.1 2797642..2798217(-) (rok) [Bacillus sp. FJAT-14266]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=195201 BGM23_RS14365 WP_003232378.1 2797642..2798217(-) (rok) [Bacillus sp. FJAT-14266]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment