Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | BGM23_RS11785 | Genome accession | NZ_CP017072 |
| Coordinates | 2202852..2203982 (-) | Length | 376 a.a. |
| NCBI ID | WP_046663334.1 | Uniprot ID | - |
| Organism | Bacillus sp. FJAT-14266 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2197852..2208982
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGM23_RS11760 (BGM23_11760) | - | 2198047..2198772 (+) | 726 | WP_072592544.1 | helix-turn-helix domain-containing protein | - |
| BGM23_RS11765 (BGM23_11765) | csaA | 2198837..2199169 (+) | 333 | WP_029726834.1 | chaperone CsaA | - |
| BGM23_RS11770 (BGM23_11770) | - | 2199418..2200854 (-) | 1437 | WP_119899493.1 | flavin monoamine oxidase family protein | - |
| BGM23_RS11775 (BGM23_11775) | - | 2200983..2201549 (+) | 567 | WP_046663338.1 | SMI1/KNR4 family protein | - |
| BGM23_RS22140 | - | 2201637..2201791 (+) | 155 | Protein_2278 | T7SS effector LXG polymorphic toxin | - |
| BGM23_RS22145 | - | 2201789..2202143 (+) | 355 | Protein_2279 | UV damage repair protein UvrX | - |
| BGM23_RS22150 (BGM23_11780) | - | 2202365..2202565 (+) | 201 | WP_021481449.1 | hypothetical protein | - |
| BGM23_RS21885 | - | 2202719..2202862 (-) | 144 | WP_153801665.1 | hypothetical protein | - |
| BGM23_RS11785 (BGM23_11785) | rapC | 2202852..2203982 (-) | 1131 | WP_046663334.1 | tetratricopeptide repeat protein | Regulator |
| BGM23_RS22335 | - | 2204115..2204261 (-) | 147 | Protein_2283 | phage holin | - |
| BGM23_RS11790 (BGM23_11790) | - | 2205057..2205431 (-) | 375 | WP_046663332.1 | YoqO family protein | - |
| BGM23_RS21440 | - | 2205695..2205991 (-) | 297 | Protein_2285 | SOS response-associated peptidase family protein | - |
| BGM23_RS11800 (BGM23_11800) | - | 2206172..2206537 (-) | 366 | WP_029318057.1 | hypothetical protein | - |
| BGM23_RS11810 (BGM23_11810) | - | 2207185..2207886 (+) | 702 | WP_046663327.1 | hypothetical protein | - |
| BGM23_RS11815 (BGM23_11815) | - | 2208051..2208323 (+) | 273 | WP_046663912.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 44392.26 Da Isoelectric Point: 6.4230
>NTDB_id=195195 BGM23_RS11785 WP_046663334.1 2202852..2203982(-) (rapC) [Bacillus sp. FJAT-14266]
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYEFDKKDYIKAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAVPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKKYDKAA
EYIEQAVSLYENDKSDLLPHTLFTLTQIYFKMKDIEKAFILYKKGIKKAQAINDDVLVAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDARIQIQRGECLYEI
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEERPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYEFDKKDYIKAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAVPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKKYDKAA
EYIEQAVSLYENDKSDLLPHTLFTLTQIYFKMKDIEKAFILYKKGIKKAQAINDDVLVAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDARIQIQRGECLYEI
Nucleotide
Download Length: 1131 bp
>NTDB_id=195195 BGM23_RS11785 WP_046663334.1 2202852..2203982(-) (rapC) [Bacillus sp. FJAT-14266]
ATGGAGCAATTAATTCCGTCATCCACGGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCTGAGATATTAAAAGCAGAAGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGTTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGAACGCCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGTCAAACAAAGCTTAAAGGTGTCCTGGAATATTACTGCAATTTCTTTAGAGGAAT
GTACGAATTTGATAAGAAGGATTATATAAAAGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ACGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAGCAGCACTTAACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCTTTTGTTGTAGC
AGGCAACTTTGATGATCTGGAAAGTCATGAAAAAGCAGTTCCGCATCTTCAAAGAGCATTAAAAGATTCGAAAGCTATAA
ACAAGCACAAACTAATTGGTGCATCGTTATATAATTTGGGGAACTGTTATTATAAGATGAAAAAGTATGACAAAGCTGCT
GAATATATTGAACAAGCAGTCTCATTGTACGAAAACGATAAAAGTGACCTTCTCCCTCATACGTTATTTACACTGACACA
AATTTACTTCAAAATGAAGGATATTGAAAAAGCCTTTATTCTTTATAAAAAAGGAATCAAGAAAGCACAAGCCATTAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTCCGAACT
TTTTCTGTACTTAAAGATAATGTAATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGACGTCATGGTGGATGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA
ATGGAGCAATTAATTCCGTCATCCACGGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCTGAGATATTAAAAGCAGAAGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGTTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGAACGCCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGTCAAACAAAGCTTAAAGGTGTCCTGGAATATTACTGCAATTTCTTTAGAGGAAT
GTACGAATTTGATAAGAAGGATTATATAAAAGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ACGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAGCAGCACTTAACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCTTTTGTTGTAGC
AGGCAACTTTGATGATCTGGAAAGTCATGAAAAAGCAGTTCCGCATCTTCAAAGAGCATTAAAAGATTCGAAAGCTATAA
ACAAGCACAAACTAATTGGTGCATCGTTATATAATTTGGGGAACTGTTATTATAAGATGAAAAAGTATGACAAAGCTGCT
GAATATATTGAACAAGCAGTCTCATTGTACGAAAACGATAAAAGTGACCTTCTCCCTCATACGTTATTTACACTGACACA
AATTTACTTCAAAATGAAGGATATTGAAAAAGCCTTTATTCTTTATAAAAAAGGAATCAAGAAAGCACAAGCCATTAACG
ATGATGTCTTAGTTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTCCGAACT
TTTTCTGTACTTAAAGATAATGTAATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGACGTCATGGTGGATGCCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
50.798 |
100 |
0.508 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
45.119 |
100 |
0.455 |