Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BGM23_RS00815 | Genome accession | NZ_CP017072 |
| Coordinates | 138009..138299 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus sp. FJAT-14266 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 133009..143299
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BGM23_RS00800 (BGM23_00800) | - | 133204..134517 (-) | 1314 | WP_029726392.1 | ubiquitin-like domain-containing protein | - |
| BGM23_RS00805 (BGM23_00805) | - | 134673..135440 (-) | 768 | WP_029726393.1 | TatD family hydrolase | - |
| BGM23_RS00810 (BGM23_00810) | metG | 135520..137514 (-) | 1995 | WP_029726394.1 | methionine--tRNA ligase | - |
| BGM23_RS00815 (BGM23_00815) | abrB | 138009..138299 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BGM23_RS00820 (BGM23_00820) | rsmI | 138348..139226 (-) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BGM23_RS00825 (BGM23_00825) | - | 139201..139500 (-) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| BGM23_RS00830 (BGM23_00830) | - | 139487..140230 (-) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BGM23_RS00835 (BGM23_00835) | yabA | 140289..140648 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| BGM23_RS00840 (BGM23_00840) | ricT | 140663..141490 (-) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| BGM23_RS00845 (BGM23_00845) | holB | 141493..142482 (-) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| BGM23_RS00850 (BGM23_00850) | - | 142494..142934 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| BGM23_RS00855 (BGM23_00855) | darA | 142947..143276 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=195150 BGM23_RS00815 WP_003226760.1 138009..138299(+) (abrB) [Bacillus sp. FJAT-14266]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=195150 BGM23_RS00815 WP_003226760.1 138009..138299(+) (abrB) [Bacillus sp. FJAT-14266]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |