Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   BFP67_RS05160 Genome accession   NZ_CP017069
Coordinates   1088275..1089318 (+) Length   347 a.a.
NCBI ID   WP_002461334.1    Uniprot ID   A0A853V5Y6
Organism   Staphylococcus lugdunensis strain K93G     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1083275..1094318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFP67_RS05135 (BFP67_06345) - 1083565..1084926 (-) 1362 WP_037540479.1 FAD-dependent oxidoreductase -
  BFP67_RS05140 (BFP67_06340) - 1085060..1086040 (-) 981 WP_002492696.1 FUSC family protein -
  BFP67_RS05145 (BFP67_06335) map 1086285..1087040 (+) 756 WP_002461338.1 type I methionyl aminopeptidase -
  BFP67_RS05150 (BFP67_06330) - 1087166..1087552 (+) 387 WP_002477960.1 hypothetical protein -
  BFP67_RS05155 (BFP67_06325) liaF 1087577..1088278 (+) 702 WP_002461335.1 cell wall-active antibiotics response protein LiaF -
  BFP67_RS05160 (BFP67_06320) vraS 1088275..1089318 (+) 1044 WP_002461334.1 sensor histidine kinase Regulator
  BFP67_RS05165 (BFP67_06315) vraR 1089308..1089937 (+) 630 WP_002461333.1 two-component system response regulator VraR Regulator
  BFP67_RS05170 (BFP67_06310) - 1090110..1091339 (-) 1230 WP_002492699.1 YihY/virulence factor BrkB family protein -
  BFP67_RS05175 (BFP67_06305) - 1091542..1091826 (-) 285 WP_002461330.1 YtxH domain-containing protein -
  BFP67_RS05180 (BFP67_06300) - 1091833..1092297 (-) 465 WP_002492719.1 low molecular weight protein-tyrosine-phosphatase -
  BFP67_RS05185 (BFP67_06295) - 1092461..1092646 (+) 186 WP_002492715.1 DUF1128 domain-containing protein -
  BFP67_RS05190 (BFP67_06290) - 1092659..1093897 (+) 1239 WP_002461326.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39934.41 Da        Isoelectric Point: 5.9679

>NTDB_id=195077 BFP67_RS05160 WP_002461334.1 1088275..1089318(+) (vraS) [Staphylococcus lugdunensis strain K93G]
MNHYIRAIGSMLILVYSLMIAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSILAFKINQQNDWIKT
QVEHAIEGETVGINDQNIELYNETIDLYHTLVPLNQELHRLRMKTQNLTNENYNLNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELEPPLDQQIPVLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVIDLQKKVPMKVVHDI
EEFKVPKGLEDHLFRITQEAISNTLRHSKGTKVTVELFNKADYLLLRIQDNGIGFNVDDKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSHDN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=195077 BFP67_RS05160 WP_002461334.1 1088275..1089318(+) (vraS) [Staphylococcus lugdunensis strain K93G]
ATGAACCACTATATTCGAGCAATCGGCTCAATGTTGATACTAGTGTATAGCTTAATGATTGCTTTTCTGTTTATTGATAA
AGTATTCGTTAATATCATTTACTTTCAAGGCATGTTTTATACACAAATATTTGGAATACCAGTATTCCTTTTCTTAAATT
TGGTTATTATTTTATTATGTATTATTGTGGGCTCTATATTAGCTTTTAAAATCAATCAACAAAATGATTGGATCAAAACA
CAAGTAGAGCATGCAATAGAAGGGGAAACAGTTGGTATAAATGATCAAAATATAGAATTGTATAATGAAACAATTGATTT
ATATCATACATTAGTTCCCTTAAATCAAGAGTTACACCGATTAAGAATGAAAACACAAAACTTAACAAATGAAAATTATA
ATTTAAATGATGTAAAAGTGAAAAAAATAATTGAAGACGAACGTCAACGTCTAGCTCGAGAATTACATGATTCAGTGAGC
CAGCAATTATTTGCAGCCAGTATGATGTTATCTGCAATTAAAGAAACAGAGCTAGAACCACCTTTAGATCAACAAATTCC
AGTTTTAGAAAAAATGGTGCAAGATTCACAACTTGAAATGAGAGCACTCTTATTACATCTAAGACCAATTGGTTTAAAGG
ACAAGTCGTTGGGTGAAGGTATTAAAGATTTAGTCATCGATTTACAGAAAAAAGTACCGATGAAAGTGGTTCACGATATT
GAAGAATTTAAAGTGCCTAAAGGTTTAGAAGATCATTTGTTTAGAATTACTCAAGAAGCCATCTCTAATACTTTAAGACA
TTCAAAAGGAACTAAAGTTACTGTAGAATTATTTAATAAAGCAGATTATTTATTATTAAGAATACAAGATAATGGCATTG
GATTTAATGTTGATGATAAAGTCGAACAAAGTTATGGCTTGAAAAATATGCGCGAACGTGCGTTAGAAATAGGTGCAACA
TTTCATATTGTATCATTGCCTGATTCTGGAACAAGAATAGAGGTTAAAGCACCGTTAAACAAGGAGGATTCACATGACAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A853V5Y6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.066

100

0.911


Multiple sequence alignment