Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   BGL51_RS03685 Genome accession   NZ_CP017064
Coordinates   691931..692224 (+) Length   97 a.a.
NCBI ID   WP_014621407.1    Uniprot ID   A0AAU9H9S0
Organism   Streptococcus thermophilus strain ST3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 686931..697224
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGL51_RS03665 (BGL51_03675) - 687094..688431 (+) 1338 WP_095559308.1 SIR2 family protein -
  BGL51_RS03670 (BGL51_03680) - 688424..690127 (+) 1704 WP_095559309.1 ATP-binding protein -
  BGL51_RS03675 (BGL51_03685) - 690172..691410 (+) 1239 WP_232505743.1 restriction endonuclease subunit S -
  BGL51_RS03680 (BGL51_03690) - 691623..691941 (+) 319 Protein_661 type II toxin-antitoxin system RelE/ParE family toxin -
  BGL51_RS03685 (BGL51_03695) HI0659 691931..692224 (+) 294 WP_014621407.1 helix-turn-helix domain-containing protein Machinery gene
  BGL51_RS03690 (BGL51_03700) - 692246..693847 (+) 1602 WP_095559310.1 type I restriction-modification system subunit M -
  BGL51_RS03695 - 693955..694809 (+) 855 Protein_664 Rpn family recombination-promoting nuclease/putative transposase -
  BGL51_RS03700 (BGL51_03715) - 694882..695781 (+) 900 WP_309252124.1 DNA/RNA non-specific endonuclease -
  BGL51_RS03710 (BGL51_03720) - 695931..696491 (+) 561 WP_064355522.1 LemA family protein -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10744.50 Da        Isoelectric Point: 5.8962

>NTDB_id=194972 BGL51_RS03685 WP_014621407.1 691931..692224(+) (HI0659) [Streptococcus thermophilus strain ST3]
MKNSAIGSNWKDVRAELFTKEEILESDLRVAIMTELIEARHEKGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKI

Nucleotide


Download         Length: 294 bp        

>NTDB_id=194972 BGL51_RS03685 WP_014621407.1 691931..692224(+) (HI0659) [Streptococcus thermophilus strain ST3]
ATGAAGAATAGTGCCATCGGCAGCAATTGGAAAGATGTGAGAGCAGAGCTCTTCACCAAGGAAGAAATCCTGGAAAGTGA
TTTACGGGTCGCGATTATGACTGAGCTGATCGAGGCTCGACACGAAAAGGGCATTAGCCAAAAGAAACTAGAAGAACTCA
GTGGGGTCAGTCAACCGGTCATCGCTCGGATGGAGACAGGAAAGACCAGTCCTCAATTGGACACGGTTTTGAAAGTCTTA
GCCAGTCTGGGCAAGACCCTCGCTGTCGTCCCACTGGAACAAGAAAAGATCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

60.44

93.814

0.567

Multiple sequence alignment