Detailed information NTG0194894

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AM408_RS22715
• Genome accession: NZ_CP021683
• Coordinates: 4217926..4218951 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain AR_0162
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4212926..4223951

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM408_RS22695 (AM408_22605)	metJ	4213987..4214304 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AM408_RS22700 (AM408_22610)	yiiX	4214488..4215096 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AM408_RS22705 (AM408_22615)	rpmE	4215157..4215369 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AM408_RS22710 (AM408_22620)	priA	4215572..4217770 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
AM408_RS22715 (AM408_22625)	cytR	4217926..4218951 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AM408_RS22720 (AM408_22630)	ftsN	4219043..4220002 (+)	960	WP_000068828.1	cell division protein FtsN	-
AM408_RS22725 (AM408_22635)	hslV	4220095..4220625 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AM408_RS22730 (AM408_22640)	hslU	4220635..4221966 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AM408_RS22735 (AM408_22645)	menA	4222033..4222959 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AM408_RS22740 (AM408_22650)	rraA	4223052..4223537 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AM408_RS22745 (AM408_22655)	zapB	4223622..4223867 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=194894 AM408_RS22715 WP_000644904.1 4217926..4218951(+) (cytR) [Escherichia coli strain AR_0162]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=194894 AM408_RS22715 WP_000644904.1 4217926..4218951(+) (cytR) [Escherichia coli strain AR_0162]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628