Detailed information NTG0194891

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: FORC47_RS26725
• Genome accession: NZ_CP017060
• Coordinates: 5036433..5037782 (-)
• Length: 449 a.a.
• NCBI ID: WP_078400875.1
• Uniprot ID: -
• Organism: Bacillus cereus strain FORC_047
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5031433..5042782

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC47_RS26705 (FORC47_5084)	secA	5031759..5034266 (-)	2508	WP_075717067.1	preprotein translocase subunit SecA	-
FORC47_RS26710 (FORC47_5085)	hpf	5034540..5035082 (-)	543	WP_000671193.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
FORC47_RS26715 (FORC47_5087)	cspC	5035406..5035603 (-)	198	WP_001990088.1	cold shock protein CspC	-
FORC47_RS26720	-	5035730..5036433 (-)	704	Protein_5035	ComF family protein	-
FORC47_RS26725 (FORC47_5090)	comFA	5036433..5037782 (-)	1350	WP_078400875.1	ATP-dependent helicase ComFA	Machinery gene
FORC47_RS26730 (FORC47_5092)	-	5037910..5039337 (-)	1428	WP_157676163.1	NlpC/P60 family protein	-
FORC47_RS26735 (FORC47_5093)	-	5039486..5039800 (-)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
FORC47_RS26745 (FORC47_5094)	-	5039973..5040815 (-)	843	WP_000684727.1	DegV family protein	-
FORC47_RS26750 (FORC47_5095)	-	5041052..5041687 (+)	636	WP_089171983.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51136.97 Da
• Isoelectric Point: 10.0088

>NTDB_id=194891 FORC47_RS26725 WP_078400875.1 5036433..5037782(-) (comFA) [Bacillus cereus strain FORC_047]
MLAGKQLLLEELSSDLQRELNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCAYCRKCITMGRVS
ECAVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKRKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVMVVDEIDAFPYCADQMLQYAVKQAM
KERAARIYLTATPDETWKRKFRRGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLIHKRIPRVLLQWLQTYLNKKYPIFL
FVPHVRYIEEISLLLKSLNKRIEGVHAEDPGRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVVYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=194891 FORC47_RS26725 WP_078400875.1 5036433..5037782(-) (comFA) [Bacillus cereus strain FORC_047]
ATGCTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGGAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGCGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCGCATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGAACGTT
GTCTACTGGTCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCGAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTTCTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTGGATAAAGAAAAAGATGCAGTACTAGTCGTTGCAACCACGCATCAATTATTGCGTTATTATAGGGCGTTTC
ATGTCATGGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAGAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAGAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCTTTGCCAGTTCCTTTGTTTTGTTGGTGCGGGAATTGGAAAAAAA
GCCTCATTCATAAAAGAATTCCTCGAGTTTTACTACAGTGGTTACAAACGTACTTAAATAAAAAATATCCTATTTTTTTA
TTTGTTCCCCATGTGCGATATATAGAAGAGATAAGCCTGTTGTTAAAGTCATTAAACAAGCGAATTGAAGGTGTACATGC
AGAAGATCCGGGTAGAAAAGAAAAAGTAGCGGCTTTCAGAAAAGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACAGTAAAAAATTTGCAAGTAGCGGTTTTAGGGGCGGAAGAAGAAATATTCTCAGAAAGTGCACTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCGTTTATTTTCACTATGGTAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTGA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.131	98.441	0.503
comFA	Latilactobacillus sakei subsp. sakei 23K	41.709	88.641	0.37