Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   FORC47_RS21540 Genome accession   NZ_CP017060
Coordinates   4111009..4111803 (-) Length   264 a.a.
NCBI ID   WP_011110369.1    Uniprot ID   A0A9Q5QPF5
Organism   Bacillus cereus strain FORC_047     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4106009..4116803
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC47_RS21515 (FORC47_4097) - 4106536..4108608 (-) 2073 WP_089171745.1 sigma-54 interaction domain-containing protein -
  FORC47_RS21520 (FORC47_4098) - 4108746..4108979 (+) 234 WP_001190211.1 DUF2627 domain-containing protein -
  FORC47_RS21525 (FORC47_4099) - 4109029..4109757 (-) 729 WP_000172589.1 glycerophosphodiester phosphodiesterase -
  FORC47_RS21530 (FORC47_4100) - 4109808..4109954 (+) 147 WP_001247671.1 YycC family protein -
  FORC47_RS21535 (FORC47_4101) - 4110194..4110757 (-) 564 WP_016080328.1 PRK06770 family protein -
  FORC47_RS21540 (FORC47_4102) spo0A 4111009..4111803 (-) 795 WP_011110369.1 sporulation transcription factor Spo0A Regulator
  FORC47_RS21550 (FORC47_4103) spoIVB 4112091..4113389 (-) 1299 WP_002000940.1 SpoIVB peptidase -
  FORC47_RS21555 (FORC47_4104) recN 4113508..4115247 (-) 1740 WP_000947734.1 DNA repair protein RecN Machinery gene
  FORC47_RS21560 (FORC47_4105) argR 4115512..4115961 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29415.18 Da        Isoelectric Point: 7.1175

>NTDB_id=194878 FORC47_RS21540 WP_011110369.1 4111009..4111803(-) (spo0A) [Bacillus cereus strain FORC_047]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=194878 FORC47_RS21540 WP_011110369.1 4111009..4111803(-) (spo0A) [Bacillus cereus strain FORC_047]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAATGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACCACAGCAAGCCGTGTGGAGCGAGCAATTC
GTCACGCGATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment