Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   FORC47_RS20605 Genome accession   NZ_CP017060
Coordinates   3949624..3950082 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus cereus strain FORC_047     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3944624..3955082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC47_RS20590 (FORC47_3923) - 3945294..3945530 (+) 237 WP_000283738.1 hypothetical protein -
  FORC47_RS20595 (FORC47_3924) - 3945691..3947799 (-) 2109 WP_053563730.1 polyphosphate kinase -
  FORC47_RS20600 (FORC47_3925) - 3947908..3949446 (-) 1539 WP_089171700.1 Ppx/GppA family phosphatase -
  FORC47_RS20605 (FORC47_3926) kre 3949624..3950082 (+) 459 WP_000804864.1 YkyB family protein Regulator
  FORC47_RS20610 (FORC47_3927) - 3950114..3950776 (-) 663 WP_089171701.1 YkyA family protein -
  FORC47_RS20615 (FORC47_3928) - 3951390..3952043 (-) 654 WP_089171702.1 diguanylate cyclase domain-containing protein -
  FORC47_RS20620 (FORC47_3929) - 3952207..3952440 (+) 234 WP_000939446.1 SPP1 phage holin family protein -
  FORC47_RS20625 (FORC47_3930) - 3952472..3952972 (-) 501 WP_016080436.1 hypothetical protein -
  FORC47_RS20630 (FORC47_3932) - 3953384..3954925 (+) 1542 WP_053563725.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=194876 FORC47_RS20605 WP_000804864.1 3949624..3950082(+) (kre) [Bacillus cereus strain FORC_047]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=194876 FORC47_RS20605 WP_000804864.1 3949624..3950082(+) (kre) [Bacillus cereus strain FORC_047]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment