Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   FORC47_RS06140 Genome accession   NZ_CP017060
Coordinates   1172844..1173527 (+) Length   227 a.a.
NCBI ID   WP_000350715.1    Uniprot ID   A0AAN4HLX4
Organism   Bacillus cereus strain FORC_047     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1167844..1178527
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC47_RS06110 (FORC47_1070) - 1168907..1170553 (+) 1647 WP_089170606.1 peptide ABC transporter substrate-binding protein -
  FORC47_RS06115 (FORC47_1071) - 1170583..1170786 (-) 204 WP_000559971.1 hypothetical protein -
  FORC47_RS06130 (FORC47_1072) spx 1171379..1171774 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  FORC47_RS06135 (FORC47_1073) - 1171824..1172498 (-) 675 WP_069355211.1 TerC family protein -
  FORC47_RS06140 (FORC47_1074) mecA 1172844..1173527 (+) 684 WP_000350715.1 adaptor protein MecA Regulator
  FORC47_RS06145 (FORC47_1075) - 1173600..1175144 (+) 1545 WP_000799191.1 cardiolipin synthase -
  FORC47_RS06150 (FORC47_1076) - 1175225..1176469 (+) 1245 WP_089170607.1 competence protein CoiA -
  FORC47_RS06155 (FORC47_1077) pepF 1176520..1178346 (+) 1827 WP_089170608.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26996.03 Da        Isoelectric Point: 3.9822

>NTDB_id=194862 FORC47_RS06140 WP_000350715.1 1172844..1173527(+) (mecA) [Bacillus cereus strain FORC_047]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=194862 FORC47_RS06140 WP_000350715.1 1172844..1173527(+) (mecA) [Bacillus cereus strain FORC_047]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGATGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAACAAGAGTTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTGTTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment