Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   S100027_RS22455 Genome accession   NZ_CP021677
Coordinates   4314976..4315824 (-) Length   282 a.a.
NCBI ID   WP_003178034.1    Uniprot ID   Q65CN8
Organism   Bacillus licheniformis strain SRCM100027     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 4309976..4320824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100027_RS22415 (S100027_04507) rpsR 4310181..4310420 (-) 240 WP_003178022.1 30S ribosomal protein S18 -
  S100027_RS22420 (S100027_04508) ssbA 4310472..4310984 (-) 513 WP_003178024.1 single-stranded DNA-binding protein SsbA Machinery gene
  S100027_RS22425 (S100027_04509) rpsF 4311031..4311318 (-) 288 WP_003178026.1 30S ribosomal protein S6 -
  S100027_RS22430 (S100027_04510) ychF 4311432..4312532 (-) 1101 WP_003178027.1 redox-regulated ATPase YchF -
  S100027_RS22440 (S100027_04511) - 4312711..4312917 (-) 207 WP_011201785.1 DUF951 domain-containing protein -
  S100027_RS22445 (S100027_04512) - 4313005..4314018 (-) 1014 WP_003178030.1 hypothetical protein -
  S100027_RS22450 (S100027_04513) yyaC 4314322..4314939 (+) 618 WP_003178032.1 spore protease YyaC -
  S100027_RS22455 (S100027_04514) spo0J 4314976..4315824 (-) 849 WP_003178034.1 ParB/RepB/Spo0J family partition protein Regulator
  S100027_RS22460 (S100027_04515) soj 4315817..4316578 (-) 762 WP_011201786.1 sporulation initiation inhibitor protein Soj -
  S100027_RS22465 (S100027_04516) - 4316821..4317264 (-) 444 WP_003178038.1 carboxymuconolactone decarboxylase family protein -
  S100027_RS22470 (S100027_04517) - 4317331..4318188 (-) 858 WP_003178040.1 RNA polymerase sigma-70 factor -
  S100027_RS22475 (S100027_04518) noc 4318244..4319095 (-) 852 WP_003178042.1 nucleoid occlusion protein -
  S100027_RS22480 (S100027_04519) rsmG 4319193..4319912 (-) 720 WP_003178044.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence


Protein


Download         Length: 282 a.a.        Molecular weight: 32283.41 Da        Isoelectric Point: 9.5628

>NTDB_id=194827 S100027_RS22455 WP_003178034.1 4314976..4315824(-) (spo0J) [Bacillus licheniformis strain SRCM100027]
MPKGLGKGINALFSNVDLSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDLKESILQHGVLQPIIVRKSIKGYDIVAGERR
FRAAEKAGLETIPAIVRELSESLMMEIALLENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRPHIANHLRLLT
LPEDVQKLIDNGTLSMGHGRTLLGLKNKKKLEPLVQKVVSEQLNVRQLEKLIQQLNADVPRETKKPKQVKDAVIKERESY
LRNYFGTPVTIKKQKKKGRIEIEFYSNEDLERILELLAQEDA

Nucleotide


Download         Length: 849 bp        

>NTDB_id=194827 S100027_RS22455 WP_003178034.1 4314976..4315824(-) (spo0J) [Bacillus licheniformis strain SRCM100027]
ATGCCTAAAGGTCTCGGAAAAGGGATTAATGCATTGTTTTCAAATGTTGATTTATCCGAAGAAACGGTTGAGGAAATCAA
GCTGCAAGACTTGCGGCCCAACCCTTATCAGCCAAGAAAAACGTTTGATGACCAATCGTTAAAAGATTTGAAGGAGTCCA
TTTTGCAGCACGGTGTTTTGCAGCCCATCATCGTCAGAAAGTCAATTAAAGGCTATGACATTGTGGCCGGAGAACGCCGT
TTCCGGGCTGCTGAAAAGGCCGGATTGGAAACCATTCCTGCGATTGTGCGCGAGCTGTCGGAATCCCTGATGATGGAGAT
TGCCCTATTGGAAAATCTTCAACGAGAAGACCTGTCTCCGCTTGAAGAAGCAAAAGCCTATGAATCTTTGCTCAAACATC
TCGATATGACCCAGGAACAGCTGGCGAAAAGGCTTGGAAAAAGCAGGCCTCACATCGCCAACCACTTGCGGCTGCTGACA
CTTCCTGAAGACGTTCAAAAGTTAATCGACAACGGCACGTTATCGATGGGCCATGGCCGAACATTGCTTGGATTGAAAAA
CAAGAAAAAGCTTGAGCCGCTTGTTCAAAAGGTCGTGTCCGAACAGTTGAACGTCCGCCAGTTGGAAAAGTTAATTCAAC
AGTTGAACGCTGATGTTCCACGTGAAACAAAGAAGCCGAAACAAGTCAAAGATGCAGTGATCAAGGAACGGGAATCGTAT
TTGCGAAACTATTTTGGAACACCGGTGACCATTAAAAAGCAAAAGAAAAAAGGCAGGATCGAAATCGAATTCTACTCAAA
TGAAGACTTGGAGCGTATTCTCGAATTATTGGCTCAAGAAGACGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65CN8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

43.462

92.199

0.401