Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   S100027_RS22055 Genome accession   NZ_CP021677
Coordinates   4233815..4234522 (-) Length   235 a.a.
NCBI ID   WP_009329989.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM100027     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4228815..4239522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100027_RS22035 (S100027_04431) - 4228858..4229946 (-) 1089 WP_003177863.1 acyltransferase family protein -
  S100027_RS22040 (S100027_04432) - 4230094..4231980 (-) 1887 WP_011198462.1 FtsX-like permease family protein -
  S100027_RS22045 (S100027_04433) - 4231955..4232719 (-) 765 WP_003177865.1 ABC transporter ATP-binding protein -
  S100027_RS22050 (S100027_04434) - 4232811..4233818 (-) 1008 WP_003177867.1 sensor histidine kinase -
  S100027_RS22055 (S100027_04435) braR 4233815..4234522 (-) 708 WP_009329989.1 response regulator transcription factor Regulator
  S100027_RS22060 (S100027_04436) - 4234705..4235076 (+) 372 WP_003177872.1 YxeA family protein -
  S100027_RS22065 (S100027_04437) - 4235105..4236790 (-) 1686 WP_009329990.1 methyl-accepting chemotaxis protein -
  S100027_RS22070 (S100027_04438) - 4236917..4238341 (-) 1425 WP_021837835.1 alanine/glycine:cation symporter family protein -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 27071.02 Da        Isoelectric Point: 4.9777

>NTDB_id=194822 S100027_RS22055 WP_009329989.1 4233815..4234522(-) (braR) [Bacillus licheniformis strain SRCM100027]
MQKVMIVEDDPKIADLLKLHIVKYGYNVHVVKDFDRVMDEFRSTAPDLVLLDINLPSFDGYYWCRQIRQESICPVLFISA
RTGEMDQVMALENGGDDFITKPFHAEIVMAKIRSQLRRAYGEYAAKAEERLLEKEGLRLYPERLELTFAGQTAALTKKEA
DIIESLMERHPRISGREDLLAKLWDDQAYVDENTLNVNITRVRKKFQELGIEDAVETVRGAGYRLNVSWVKAGEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=194822 S100027_RS22055 WP_009329989.1 4233815..4234522(-) (braR) [Bacillus licheniformis strain SRCM100027]
ATGCAAAAAGTGATGATTGTAGAAGACGACCCGAAAATTGCAGATTTGTTAAAATTGCATATTGTCAAATACGGATACAA
CGTTCATGTAGTGAAAGACTTTGACCGTGTCATGGATGAGTTCAGAAGCACGGCGCCTGATCTTGTTCTGCTTGATATTA
ACCTGCCGAGCTTTGACGGCTACTACTGGTGCCGGCAAATCCGCCAGGAATCGATTTGCCCCGTCTTGTTTATTTCTGCG
CGGACAGGTGAAATGGATCAGGTGATGGCATTGGAAAACGGCGGAGATGACTTTATCACCAAGCCGTTTCACGCCGAGAT
CGTCATGGCAAAAATACGCAGCCAGCTTCGCAGGGCTTACGGCGAATACGCGGCGAAGGCGGAGGAACGGCTGCTGGAAA
AAGAAGGGCTGCGGCTGTATCCGGAAAGACTTGAACTGACATTTGCCGGTCAAACGGCTGCTTTGACGAAAAAAGAAGCG
GATATTATTGAAAGCTTAATGGAACGCCATCCGAGAATTTCAGGCCGCGAAGATTTGCTGGCCAAGCTGTGGGATGATCA
GGCATATGTGGATGAAAACACGCTTAATGTCAACATTACGCGCGTCAGAAAAAAGTTTCAGGAGCTCGGTATTGAAGATG
CAGTGGAAACAGTGCGGGGCGCGGGCTATCGCTTGAATGTATCCTGGGTGAAGGCGGGAGAGGAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.462

94.894

0.374