Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   MTVDSCj16_RS07840 Genome accession   NZ_CP017033
Coordinates   1498207..1499391 (-) Length   394 a.a.
NCBI ID   WP_069360668.1    Uniprot ID   A0A5T0F5Z4
Organism   Campylobacter jejuni subsp. jejuni strain MTVDSCj16     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1493207..1504391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTVDSCj16_RS07815 (MTVDSCj16_1551) fliL 1494355..1494891 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  MTVDSCj16_RS07820 (MTVDSCj16_1552) acpS 1494891..1495238 (+) 348 WP_002825806.1 holo-ACP synthase -
  MTVDSCj16_RS07825 (MTVDSCj16_1553) - 1495239..1495658 (-) 420 WP_002862076.1 hypothetical protein -
  MTVDSCj16_RS07830 (MTVDSCj16_1554) - 1495655..1497016 (-) 1362 WP_002927389.1 cytochrome P450 -
  MTVDSCj16_RS07835 (MTVDSCj16_1555) - 1497013..1498134 (-) 1122 WP_002875237.1 hypothetical protein -
  MTVDSCj16_RS07840 (MTVDSCj16_1556) kpsS 1498207..1499391 (-) 1185 WP_069360668.1 capsule polysaccharide modification protein KpsS Regulator
  MTVDSCj16_RS07845 (MTVDSCj16_1557) kpsC 1499388..1501457 (-) 2070 WP_052846014.1 capsular polysaccharide biosynthesis protein -
  MTVDSCj16_RS07850 (MTVDSCj16_1558) cysC 1501454..1501966 (-) 513 WP_002858462.1 cytidine diphosphoramidate kinase -
  MTVDSCj16_RS07855 (MTVDSCj16_1559) - 1501956..1502717 (-) 762 WP_002858404.1 CTP:phosphoglutamine cytidylyltransferase -
  MTVDSCj16_RS07860 (MTVDSCj16_1560) - 1502719..1503321 (-) 603 WP_002872737.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46911.55 Da        Isoelectric Point: 9.9292

>NTDB_id=194715 MTVDSCj16_RS07840 WP_069360668.1 1498207..1499391(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVYNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=194715 MTVDSCj16_RS07840 WP_069360668.1 1498207..1499391(-) (kpsS) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGACGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGTATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATATAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T0F5Z4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.985

100

0.99


Multiple sequence alignment