Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   MTVDSCj16_RS07530 Genome accession   NZ_CP017033
Coordinates   1435361..1436329 (+) Length   322 a.a.
NCBI ID   WP_043012924.1    Uniprot ID   A0A5T0F7R6
Organism   Campylobacter jejuni subsp. jejuni strain MTVDSCj16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1430361..1441329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTVDSCj16_RS07505 (MTVDSCj16_1493) cdsA 1431271..1431996 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  MTVDSCj16_RS07510 (MTVDSCj16_1494) - 1432005..1432343 (-) 339 WP_002852397.1 hypothetical protein -
  MTVDSCj16_RS07515 (MTVDSCj16_1495) - 1432345..1433652 (-) 1308 WP_002864240.1 NFACT family protein -
  MTVDSCj16_RS07520 (MTVDSCj16_1496) mobA 1433714..1434289 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  MTVDSCj16_RS07525 (MTVDSCj16_1497) pldA 1434286..1435275 (+) 990 WP_002864239.1 phospholipase A -
  MTVDSCj16_RS07530 (MTVDSCj16_1498) ceuB 1435361..1436329 (+) 969 WP_043012924.1 ABC transporter permease Machinery gene
  MTVDSCj16_RS07535 (MTVDSCj16_1499) ceuC 1436322..1437260 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  MTVDSCj16_RS07540 (MTVDSCj16_1500) ceuD 1437257..1438012 (+) 756 WP_002858409.1 ABC transporter ATP-binding protein -
  MTVDSCj16_RS07545 (MTVDSCj16_1501) ceuB 1438025..1439017 (+) 993 WP_002898681.1 enterochelin ABC transporter substrate-binding protein CeuB -
  MTVDSCj16_RS07555 (MTVDSCj16_1503) - 1439243..1439797 (-) 555 WP_043012925.1 membrane protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35439.37 Da        Isoelectric Point: 9.6678

>NTDB_id=194713 MTVDSCj16_RS07530 WP_043012924.1 1435361..1436329(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITGLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=194713 MTVDSCj16_RS07530 WP_043012924.1 1435361..1436329(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTGGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T0F7R6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.758

100

0.988


Multiple sequence alignment