Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | MTVDSCj16_RS06525 | Genome accession | NZ_CP017033 |
| Coordinates | 1232366..1233325 (+) | Length | 319 a.a. |
| NCBI ID | WP_069360625.1 | Uniprot ID | A0A5T0F4Q6 |
| Organism | Campylobacter jejuni subsp. jejuni strain MTVDSCj16 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1227366..1238325
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MTVDSCj16_RS06500 (MTVDSCj16_1292) | neuC | 1227954..1229078 (+) | 1125 | WP_002868604.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| MTVDSCj16_RS06505 (MTVDSCj16_1293) | - | 1229071..1230018 (+) | 948 | WP_042635875.1 | glycosyltransferase | - |
| MTVDSCj16_RS06510 (MTVDSCj16_1294) | - | 1230015..1230680 (+) | 666 | WP_002935341.1 | acylneuraminate cytidylyltransferase family protein | - |
| MTVDSCj16_RS06515 (MTVDSCj16_1295) | - | 1230804..1231436 (+) | 633 | WP_042635876.1 | CatB-related O-acetyltransferase | - |
| MTVDSCj16_RS06520 (MTVDSCj16_1296) | waaV | 1231495..1232307 (-) | 813 | WP_002918295.1 | glycosyltransferase family 2 protein | - |
| MTVDSCj16_RS06525 (MTVDSCj16_1297) | waaF | 1232366..1233325 (+) | 960 | WP_069360625.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| MTVDSCj16_RS06530 (MTVDSCj16_1298) | gmhA | 1233306..1233866 (-) | 561 | WP_002787744.1 | D-sedoheptulose 7-phosphate isomerase | - |
| MTVDSCj16_RS06535 (MTVDSCj16_1299) | rfaE1 | 1233863..1235248 (-) | 1386 | WP_069360626.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| MTVDSCj16_RS06540 (MTVDSCj16_1300) | rfaD | 1235241..1236194 (-) | 954 | WP_069360627.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| MTVDSCj16_RS06545 (MTVDSCj16_1301) | gmhB | 1236195..1236756 (-) | 562 | Protein_1274 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| MTVDSCj16_RS06550 (MTVDSCj16_1302) | - | 1236837..1237139 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| MTVDSCj16_RS06555 (MTVDSCj16_1303) | ccoS | 1237162..1237368 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 36717.24 Da Isoelectric Point: 10.3205
>NTDB_id=194708 MTVDSCj16_RS06525 WP_069360625.1 1232366..1233325(+) (waaF) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELDKIDLSFT
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENALSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGSTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELDKIDLSFT
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENALSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGSTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL
Nucleotide
Download Length: 960 bp
>NTDB_id=194708 MTVDSCj16_RS06525 WP_069360625.1 1232366..1233325(+) (waaF) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGATAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACGCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCTCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGATAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACGCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCTCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.044 |
100 |
0.94 |