Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | MTVDSCj16_RS06185 | Genome accession | NZ_CP017033 |
| Coordinates | 1163867..1164169 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni subsp. jejuni strain MTVDSCj16 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1158867..1169169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MTVDSCj16_RS06160 (MTVDSCj16_1224) | rpsR | 1159229..1159489 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| MTVDSCj16_RS06165 (MTVDSCj16_1225) | lon | 1159550..1161925 (-) | 2376 | WP_069360616.1 | endopeptidase La | - |
| MTVDSCj16_RS06170 (MTVDSCj16_1226) | - | 1161942..1162589 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| MTVDSCj16_RS06175 (MTVDSCj16_1227) | fliW | 1162750..1163139 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| MTVDSCj16_RS06180 (MTVDSCj16_1228) | proC | 1163139..1163870 (+) | 732 | WP_069360617.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| MTVDSCj16_RS06185 (MTVDSCj16_1229) | ctsT | 1163867..1164169 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| MTVDSCj16_RS06190 (MTVDSCj16_1230) | - | 1164166..1164828 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| MTVDSCj16_RS06195 (MTVDSCj16_1231) | - | 1164825..1165277 (+) | 453 | WP_069360618.1 | hypothetical protein | - |
| MTVDSCj16_RS06200 (MTVDSCj16_1232) | hemD | 1165274..1165903 (-) | 630 | WP_052845930.1 | uroporphyrinogen-III synthase | - |
| MTVDSCj16_RS06205 (MTVDSCj16_1233) | thiE | 1165881..1166513 (-) | 633 | WP_052845929.1 | thiamine phosphate synthase | - |
| MTVDSCj16_RS06210 (MTVDSCj16_1234) | thiD | 1166503..1167315 (-) | 813 | WP_002882602.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| MTVDSCj16_RS06215 (MTVDSCj16_1235) | - | 1167312..1167998 (-) | 687 | WP_052845927.1 | endonuclease III domain-containing protein | - |
| MTVDSCj16_RS06220 (MTVDSCj16_1236) | - | 1167995..1168756 (-) | 762 | WP_002882600.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=194706 MTVDSCj16_RS06185 WP_002855822.1 1163867..1164169(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=194706 MTVDSCj16_RS06185 WP_002855822.1 1163867..1164169(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |