Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   MTVDSCj16_RS03860 Genome accession   NZ_CP017033
Coordinates   704167..704604 (+) Length   145 a.a.
NCBI ID   WP_069360547.1    Uniprot ID   A0A5T0F2G7
Organism   Campylobacter jejuni subsp. jejuni strain MTVDSCj16     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 699167..709604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTVDSCj16_RS09890 - 699796..700303 (+) 508 Protein_742 sensor histidine kinase KdpD -
  MTVDSCj16_RS09895 - 700361..701479 (+) 1119 WP_250511853.1 DUF4118 domain-containing protein -
  MTVDSCj16_RS03845 (MTVDSCj16_0763) uvrB 701581..703554 (-) 1974 WP_002855027.1 excinuclease ABC subunit UvrB -
  MTVDSCj16_RS03850 (MTVDSCj16_0764) - 703708..703938 (+) 231 WP_002852327.1 hypothetical protein -
  MTVDSCj16_RS03855 (MTVDSCj16_0765) - 703928..704170 (+) 243 WP_002854947.1 hypothetical protein -
  MTVDSCj16_RS03860 (MTVDSCj16_0766) Cj0683 704167..704604 (+) 438 WP_069360547.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  MTVDSCj16_RS03865 (MTVDSCj16_0767) priA 704586..706439 (+) 1854 WP_079854712.1 primosomal protein N' -
  MTVDSCj16_RS03870 (MTVDSCj16_0768) cipA 706449..707841 (-) 1393 Protein_749 DUF2972 domain-containing protein -
  MTVDSCj16_RS03875 (MTVDSCj16_0769) ispG 707987..709060 (+) 1074 WP_069360548.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16751.73 Da        Isoelectric Point: 8.0993

>NTDB_id=194703 MTVDSCj16_RS03860 WP_069360547.1 704167..704604(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLV

Nucleotide


Download         Length: 438 bp        

>NTDB_id=194703 MTVDSCj16_RS03860 WP_069360547.1 704167..704604(+) (Cj0683) [Campylobacter jejuni subsp. jejuni strain MTVDSCj16]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCACAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGGTATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0F2G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

99.31

100

0.993

Multiple sequence alignment