Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MTVDSCj13_RS06890 Genome accession   NZ_CP017032
Coordinates   1318160..1319128 (+) Length   322 a.a.
NCBI ID   WP_002874446.1    Uniprot ID   A0AB36G4C9
Organism   Campylobacter jejuni subsp. jejuni strain MTVDSCj13     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1313160..1324128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTVDSCj13_RS06865 (MTVDSCj13_1340) cdsA 1314071..1314796 (-) 726 WP_032586801.1 phosphatidate cytidylyltransferase -
  MTVDSCj13_RS06870 (MTVDSCj13_1341) - 1314805..1315143 (-) 339 WP_002852397.1 hypothetical protein -
  MTVDSCj13_RS06875 (MTVDSCj13_1342) - 1315145..1316452 (-) 1308 WP_032586804.1 NFACT family protein -
  MTVDSCj13_RS06880 (MTVDSCj13_1343) mobA 1316514..1317089 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  MTVDSCj13_RS06885 (MTVDSCj13_1344) pldA 1317086..1318074 (+) 989 Protein_1326 phospholipase A -
  MTVDSCj13_RS06890 (MTVDSCj13_1345) ceuB 1318160..1319128 (+) 969 WP_002874446.1 ABC transporter permease Machinery gene
  MTVDSCj13_RS06895 (MTVDSCj13_1346) ceuC 1319121..1320059 (+) 939 WP_002867309.1 iron chelate uptake ABC transporter family permease subunit -
  MTVDSCj13_RS06900 (MTVDSCj13_1347) ceuD 1320056..1320811 (+) 756 WP_002896069.1 ABC transporter ATP-binding protein -
  MTVDSCj13_RS06905 (MTVDSCj13_1348) ceuB 1320824..1321816 (+) 993 WP_032586806.1 enterochelin ABC transporter substrate-binding protein CeuB -
  MTVDSCj13_RS06915 (MTVDSCj13_1350) - 1322042..1322596 (-) 555 WP_002855904.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35455.37 Da        Isoelectric Point: 9.6678

>NTDB_id=194685 MTVDSCj13_RS06890 WP_002874446.1 1318160..1319128(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain MTVDSCj13]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=194685 MTVDSCj13_RS06890 WP_002874446.1 1318160..1319128(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain MTVDSCj13]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTATTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAAGGAAATTATGAATT
GCTCTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994

Multiple sequence alignment