Detailed information NTG0194655

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: MTVDSCj07_RS05680
• Genome accession: NZ_CP017031
• Coordinates: 1083157..1084116 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain MTVDSCj07
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1078157..1089116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTVDSCj07_RS05660 (MTVDSCj07_1087)	neuC	1078721..1079836 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
MTVDSCj07_RS09155	-	1079833..1080747 (+)	915	Protein_1085	beta-1,4-N-acetylgalactosaminyltransferase	-
MTVDSCj07_RS09160	-	1080781..1081443 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
MTVDSCj07_RS05670 (MTVDSCj07_1090)	-	1081438..1082290 (-)	853	Protein_1087	glycosyltransferase	-
MTVDSCj07_RS05675 (MTVDSCj07_1091)	waaV	1082274..1083098 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
MTVDSCj07_RS05680 (MTVDSCj07_1092)	waaF	1083157..1084116 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
MTVDSCj07_RS05685 (MTVDSCj07_1093)	gmhA	1084097..1084657 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
MTVDSCj07_RS05690 (MTVDSCj07_1094)	rfaE1	1084654..1086039 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
MTVDSCj07_RS05695 (MTVDSCj07_1095)	rfaD	1086032..1086985 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
MTVDSCj07_RS05700 (MTVDSCj07_1096)	gmhB	1086986..1087546 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
MTVDSCj07_RS05705 (MTVDSCj07_1097)	-	1087628..1087930 (+)	303	WP_002852762.1	cytochrome c	-
MTVDSCj07_RS05710 (MTVDSCj07_1098)	ccoS	1087953..1088159 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=194655 MTVDSCj07_RS05680 WP_002875425.1 1083157..1084116(+) (waaF) [Campylobacter jejuni subsp. jejuni strain MTVDSCj07]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=194655 MTVDSCj07_RS05680 WP_002875425.1 1083157..1084116(+) (waaF) [Campylobacter jejuni subsp. jejuni strain MTVDSCj07]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1