Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   CJ14980A_RS06865 Genome accession   NZ_CP017029
Coordinates   1341088..1342056 (+) Length   322 a.a.
NCBI ID   WP_002877332.1    Uniprot ID   A0A5Y3G1G4
Organism   Campylobacter jejuni subsp. jejuni strain 14980A     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1336088..1347056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJ14980A_RS06840 (CJ14980A_1335) cdsA 1336995..1337720 (-) 726 WP_002866765.1 phosphatidate cytidylyltransferase -
  CJ14980A_RS06845 (CJ14980A_1336) - 1337729..1338067 (-) 339 WP_002852397.1 hypothetical protein -
  CJ14980A_RS06850 (CJ14980A_1337) - 1338069..1339376 (-) 1308 WP_002871961.1 NFACT RNA binding domain-containing protein -
  CJ14980A_RS06855 (CJ14980A_1338) mobA 1339438..1340013 (+) 576 WP_002877330.1 molybdenum cofactor guanylyltransferase -
  CJ14980A_RS06860 (CJ14980A_1339) pldA 1340010..1341002 (+) 993 WP_002877331.1 phospholipase A -
  CJ14980A_RS06865 (CJ14980A_1340) ceuB 1341088..1342056 (+) 969 WP_002877332.1 ABC transporter permease Machinery gene
  CJ14980A_RS06870 (CJ14980A_1341) ceuC 1342049..1342987 (+) 939 WP_002866771.1 iron chelate uptake ABC transporter family permease subunit -
  CJ14980A_RS06875 (CJ14980A_1342) ceuD 1342984..1343739 (+) 756 WP_002866772.1 ABC transporter ATP-binding protein -
  CJ14980A_RS06880 (CJ14980A_1343) ceuB 1343752..1344744 (+) 993 WP_002866773.1 enterochelin ABC transporter substrate-binding protein CeuB -
  CJ14980A_RS06885 (CJ14980A_1344) - 1344900..1345121 (+) 222 WP_002853781.1 hypothetical protein -
  CJ14980A_RS06890 (CJ14980A_1345) - 1345122..1345403 (+) 282 WP_002866775.1 type II toxin-antitoxin system RelE/ParE family toxin -
  CJ14980A_RS06900 (CJ14980A_1347) - 1345764..1346318 (-) 555 WP_002855904.1 membrane protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35425.35 Da        Isoelectric Point: 9.6678

>NTDB_id=194633 CJ14980A_RS06865 WP_002877332.1 1341088..1342056(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain 14980A]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILVSLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANIMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=194633 CJ14980A_RS06865 WP_002877332.1 1341088..1342056(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain 14980A]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGTATACTTGTTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATATTATGCAAGGAAATTATGAATT
GCTCTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGACTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTCATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5Y3G1G4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991


Multiple sequence alignment