Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJ14980A_RS05545 | Genome accession | NZ_CP017029 |
| Coordinates | 1079656..1079958 (+) | Length | 100 a.a. |
| NCBI ID | WP_002936694.1 | Uniprot ID | A0A5T1QQE6 |
| Organism | Campylobacter jejuni subsp. jejuni strain 14980A | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1074656..1084958
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJ14980A_RS05520 (CJ14980A_1076) | rpsR | 1075019..1075279 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJ14980A_RS05525 (CJ14980A_1077) | lon | 1075339..1077714 (-) | 2376 | WP_052779714.1 | endopeptidase La | - |
| CJ14980A_RS05530 (CJ14980A_1078) | bamD | 1077731..1078378 (-) | 648 | WP_002936691.1 | outer membrane protein assembly factor BamD | - |
| CJ14980A_RS05535 (CJ14980A_1079) | fliW | 1078539..1078928 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJ14980A_RS05540 (CJ14980A_1080) | proC | 1078928..1079659 (+) | 732 | WP_052801667.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJ14980A_RS05545 (CJ14980A_1081) | ctsT | 1079656..1079958 (+) | 303 | WP_002936694.1 | type II secretion system protein | Machinery gene |
| CJ14980A_RS05550 (CJ14980A_1082) | - | 1079955..1080617 (+) | 663 | WP_002936695.1 | hypothetical protein | - |
| CJ14980A_RS05555 (CJ14980A_1083) | - | 1080614..1081066 (+) | 453 | WP_052817076.1 | hypothetical protein | - |
| CJ14980A_RS05560 (CJ14980A_1084) | hemD | 1081063..1081692 (-) | 630 | WP_058000706.1 | uroporphyrinogen-III synthase | - |
| CJ14980A_RS05565 (CJ14980A_1085) | thiE | 1081670..1082302 (-) | 633 | WP_052779711.1 | thiamine phosphate synthase | - |
| CJ14980A_RS05570 (CJ14980A_1086) | thiD | 1082292..1083104 (-) | 813 | WP_052779729.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJ14980A_RS05575 (CJ14980A_1087) | - | 1083101..1083787 (-) | 687 | WP_058000707.1 | endonuclease III domain-containing protein | - |
| CJ14980A_RS05580 (CJ14980A_1088) | - | 1083784..1084545 (-) | 762 | WP_058000708.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12116.19 Da Isoelectric Point: 6.2957
>NTDB_id=194627 CJ14980A_RS05545 WP_002936694.1 1079656..1079958(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 14980A]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYLQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYLQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=194627 CJ14980A_RS05545 WP_002936694.1 1079656..1079958(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 14980A]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACCTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACCTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACCTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACCTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |