Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BGI23_RS20120 Genome accession   NZ_CP017016
Coordinates   3886826..3887620 (-) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus sp. ABP14     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3881826..3892620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGI23_RS20085 (BGI23_20085) - 3882041..3882187 (+) 147 WP_001247671.1 YycC family protein -
  BGI23_RS28765 - 3882441..3882539 (-) 99 Protein_3897 sporulation initiation factor Spo0A C-terminal domain-containing protein -
  BGI23_RS20095 (BGI23_20095) - 3882781..3883017 (-) 237 WP_070806816.1 winged helix-turn-helix domain-containing protein -
  BGI23_RS20100 (BGI23_20100) - 3883290..3883748 (-) 459 WP_070806817.1 SMI1/KNR4 family protein -
  BGI23_RS20105 (BGI23_20105) - 3883768..3884220 (-) 453 WP_070806818.1 YrhA family protein -
  BGI23_RS20110 (BGI23_20110) - 3884360..3884929 (-) 570 WP_070806819.1 imm11 family protein -
  BGI23_RS20115 (BGI23_20115) - 3884966..3886252 (-) 1287 WP_083322785.1 WXG100 family type VII secretion target -
  BGI23_RS20120 (BGI23_20120) spo0A 3886826..3887620 (-) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  BGI23_RS20130 (BGI23_20130) spoIVB 3887908..3889206 (-) 1299 WP_070806820.1 SpoIVB peptidase -
  BGI23_RS20135 (BGI23_20135) recN 3889325..3891064 (-) 1740 WP_000947749.1 DNA repair protein RecN Machinery gene
  BGI23_RS20140 (BGI23_20140) argR 3891331..3891780 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=194498 BGI23_RS20120 WP_014297988.1 3886826..3887620(-) (spo0A) [Bacillus sp. ABP14]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=194498 BGI23_RS20120 WP_014297988.1 3886826..3887620(-) (spo0A) [Bacillus sp. ABP14]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCGAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822

Multiple sequence alignment