Detailed information NTG0194301

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC55_RS01215
• Genome accession: NZ_CP016987
• Coordinates: 248520..249527 (+)
• Length: 335 a.a.
• NCBI ID: WP_000224452.1
• Uniprot ID: A0A085RG68
• Organism: Vibrio cholerae strain FORC_055 isolate MFDS
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 243520..254527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC55_RS01195 (FORC55_0208)	metJ	243524..243841 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
FORC55_RS01200 (FORC55_0209)	-	243952..245229 (-)	1278	WP_032477253.1	malic enzyme-like NAD(P)-binding protein	-
FORC55_RS01205 (FORC55_0210)	rpmE	245537..245755 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
FORC55_RS01210 (FORC55_0211)	priA	246010..248214 (+)	2205	WP_096070310.1	primosomal protein N'	-
FORC55_RS01215 (FORC55_0212)	cytR	248520..249527 (+)	1008	WP_000224452.1	DNA-binding transcriptional regulator CytR	Regulator
FORC55_RS01220 (FORC55_0213)	-	249699..250250 (+)	552	WP_001891621.1	SPOR domain-containing protein	-
FORC55_RS01225 (FORC55_0214)	hslV	250387..250944 (+)	558	WP_000208247.1	ATP-dependent protease subunit HslV	-
FORC55_RS01230 (FORC55_0215)	hslU	251010..252341 (+)	1332	WP_096070311.1	HslU--HslV peptidase ATPase subunit	-
FORC55_RS01235 (FORC55_0216)	-	252445..253362 (+)	918	WP_001066162.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC55_RS01240 (FORC55_0217)	rraA	253437..253952 (+)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37018.59 Da
• Isoelectric Point: 7.0759

>NTDB_id=194301 FORC55_RS01215 WP_000224452.1 248520..249527(+) (cytR) [Vibrio cholerae strain FORC_055 isolate MFDS]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKK

Nucleotide

• Length: 1008 bp

>NTDB_id=194301 FORC55_RS01215 WP_000224452.1 248520..249527(+) (cytR) [Vibrio cholerae strain FORC_055 isolate MFDS]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCCAATTCTTTGGCGCGCAATT
TGCGCCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAGAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTGCTGCTGGGGACAGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCGCCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTGGAATTGCCAACGGTACACATTGATAAC
CTGACCTCGGCATTTGAGGCGGTAAACTATCTCACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCCGGTCCACAACA
TGCTGCGCTGTGCCAATTCCGTCATCAAGGCTATCAACAGGCGCTGCGTCGTGCTGGTATCACCATGAACCCGACTTACT
GCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCTGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCGATTGGCGCAATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCT
CTCCGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACCACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGCTGATGATGCTCGAATTATTGCGTGGACATGATGTGCGTGCAGGATCGCGTCTTTTGGAG
ACCAAGCTGGTCGTGCGTGAGAGTGCTGCGCCGCCAAGCAAGAAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A085RG68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	100	100	1
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904