Detailed information NTG0194093

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: CCD82_RS00345
• Genome accession: NZ_CP021522
• Coordinates: 57686..60679 (-)
• Length: 997 a.a.
• NCBI ID: WP_149385543.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain 06-178
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 52686..65679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCD82_RS00310 (CCD82_00310)	-	53376..53987 (-)	612	WP_002234297.1	hypothetical protein	-
CCD82_RS00320 (CCD82_00330)	-	54835..55224 (-)	390	WP_002217956.1	endonuclease domain-containing protein	-
CCD82_RS00325 (CCD82_00345)	-	55785..55922 (-)	138	WP_002214606.1	VOC family protein	-
CCD82_RS00330 (CCD82_00350)	carA	55968..57101 (-)	1134	WP_002235181.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
CCD82_RS00345 (CCD82_00365)	pilC	57686..60679 (-)	2994	WP_149385543.1	PilC family type IV pilus tip adhesin	Machinery gene
CCD82_RS00360 (CCD82_00380)	-	61603..62568 (+)	966	WP_002228915.1	IS30-like element IS1655 family transposase	-
CCD82_RS00365 (CCD82_00395)	apbC	63149..64228 (-)	1080	WP_002257677.1	iron-sulfur cluster carrier protein ApbC	-
CCD82_RS00375 (CCD82_00405)	-	64593..65102 (+)	510	WP_002229886.1	protein disulfide oxidoreductase	-

Sequence

Protein

• Length: 997 a.a.
• Molecular weight: 109011.12 Da
• Isoelectric Point: 9.6748

>NTDB_id=194093 CCD82_RS00345 WP_149385543.1 57686..60679(-) (pilC) [Neisseria meningitidis strain 06-178]
MNKQNQPEVKREGSYSTLREKDRKRKFDFNANNGGGGSVSFNNSDELVSRQNGTAVFGTATYLPPYGKVSGFDDKRLKER
GNAVNWIHTTHPGLIGYSYAGVVCRNSTGCPQLVYKTRFSFDNTGLAKNAGMLDSHPDPSRENSPIYKLKDYPWLGVSFN
LGSENTVKNSQSSNRLISSFSENNNNQTIVSTTESHPISLGDGQREHTAVVYYLNAKLHLLNKKQIQNITDKTVQLGVLK
PSIDVKTQRTGFGGILSFWASWDIKDTGQIPVKLGLQQVKAGRCVNANNPNKSTKAPSPALTAPALWFGPVQNGKVQMYS
ASVSTYPDSSSSRIYLQNLKRKDDPGRPGRYSLATLNKSDIESREPTFTGRQTVIRLDKGVHQIKLKGNEVEGFKGNNGN
DTFGIVSEGSFMPDASEWKKVLLPWTVRGFADDSKFKAFNKEKNNDNKPKYSQRYRIRENGNNGKRDLGDIVNSPIVAVG
EYLATSANDGMVHIFKKGNGGDARDYSLKLSYIPGTMPRKDIQSQDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVNNL
NGQDRVFMFGAMGFGGRGAYALDLTKADGNDPTKASLFDVKDNGNNGNNRVELGYTVGTPQIGKTHNGKYAAFLASGYAT
KEITSGENKTALYVYDLENNNGTPIAKIEVPNGKGGLSSPTLVDKDLDGTIDIAYAGDRGGKMYRFDLSSQSPDQWTVRP
IFEGTKPITSAPAISQLKDKRVVIFGTGSDLSEDDVDKMDEQYIYGIFDDDTETTGNVKVDLKGLGGGLLEQHLTQEDKT
LFLTDYKRSDGSGNKGWVVKLKDGQRVTVKPTVVLRTAFVTIHKYTGNDKCGAETAILGINTADGGKLTKKSARPIVPDA
NTKVAQYSGDKKTSSGKSIPIGCMQKGNEIVCPNGYVYDKPVNVRYLDEKKTDGFSTTADGDAGGSGIDPAGKRSGKNNR
CFSQKGVRTLLMNDLDSLDITGPTCGMKRISWREIFY

Nucleotide

• Length: 2994 bp

>NTDB_id=194093 CCD82_RS00345 WP_149385543.1 57686..60679(-) (pilC) [Neisseria meningitidis strain 06-178]
ATGAACAAACAAAATCAGCCGGAGGTAAAGCGGGAGGGTTCATATTCAACCTTAAGGGAAAAAGACAGGAAACGCAAATT
TGACTTTAATGCGAACAACGGGGGTGGAGGCTCTGTCTCATTCAACAATAGCGATGAGCTTGTTTCTCGACAAAACGGTA
CTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATGACAAAAGGCTGAAAGAGCGC
GGCAATGCCGTTAATTGGATTCATACGACCCACCCAGGGTTGATAGGCTACAGCTACGCCGGTGTCGTATGCAGAAACAG
CACAGGCTGTCCCCAACTTGTCTATAAAACCCGATTTTCCTTCGACAACACCGGTTTGGCAAAAAATGCGGGCATGCTGG
ATAGTCACCCGGACCCAAGCCGCGAAAATTCGCCCATTTACAAATTGAAAGATTATCCATGGTTGGGCGTATCTTTCAAT
TTGGGCAGCGAGAATACCGTCAAAAATAGCCAATCATCCAACAGATTGATATCTTCTTTTAGTGAAAACAATAATAATCA
AACCATCGTCTCTACGACAGAAAGCCACCCTATTTCCCTTGGCGACGGGCAGCGCGAACATACCGCCGTGGTCTATTATC
TGAACGCCAAGCTGCACCTGCTGAATAAAAAACAGATTCAAAATATCACCGACAAAACAGTGCAGTTGGGTGTCTTGAAG
CCGAGCATCGATGTGAAGACACAAAGGACGGGGTTTGGCGGCATTCTATCTTTTTGGGCTAGTTGGGACATTAAAGATAC
CGGGCAGATTCCAGTCAAGCTCGGCCTGCAGCAAGTCAAAGCAGGCCGCTGCGTCAACGCAAATAACCCCAATAAGAGTA
CCAAAGCCCCTTCCCCCGCCCTGACTGCCCCCGCGCTGTGGTTCGGACCTGTGCAAAATGGTAAGGTGCAGATGTATTCC
GCTTCGGTTTCCACCTACCCCGACAGTTCGAGCAGCCGCATCTACCTTCAAAATCTGAAAAGAAAAGACGACCCCGGCAG
ACCCGGCCGCTATTCCCTCGCAACCTTGAATAAGTCGGATATTGAAAGTCGAGAGCCGACTTTCACAGGGCGGCAAACCG
TCATCCGATTGGATAAAGGCGTACATCAGATCAAACTTAAAGGCAATGAGGTCGAAGGTTTTAAGGGAAACAACGGCAAC
GACACTTTCGGCATTGTTAGTGAAGGGAGCTTCATGCCTGATGCCAGCGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGT
TCGGGGTTTTGCTGATGACAGTAAATTTAAAGCATTCAACAAAGAAAAAAACAACGACAACAAGCCAAAATACAGCCAAA
GATACCGCATCCGCGAAAACGGCAACAACGGCAAGCGCGATTTGGGCGACATCGTCAACAGCCCCATCGTGGCGGTCGGC
GAGTATTTGGCTACTTCCGCCAACGACGGGATGGTGCATATCTTCAAAAAAGGCAACGGCGGGGACGCGCGCGACTATAG
TCTGAAGCTCAGCTACATCCCGGGCACGATGCCGCGCAAGGATATTCAAAGTCAAGACTCCACCCTCGCCAAAGAGCTGC
GCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCAAGTTAACAACTTA
AATGGGCAAGACCGCGTGTTTATGTTCGGCGCGATGGGCTTTGGCGGCAGAGGTGCGTATGCCTTGGATTTGACCAAAGC
CGACGGCAATGACCCGACAAAAGCCTCTTTGTTTGATGTAAAAGATAATGGCAATAACGGCAATAATCGCGTGGAATTAG
GCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCACAACGGCAAATACGCCGCTTTCCTCGCCTCCGGTTATGCGACT
AAAGAAATTACCAGCGGCGAGAATAAAACCGCGCTGTATGTGTATGATTTGGAAAACAACAACGGTACGCCGATTGCAAA
AATCGAAGTACCCAACGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACAATCGATATCG
CCTATGCCGGCGATCGCGGCGGGAAAATGTACCGCTTTGATTTGAGCAGTCAAAGTCCTGATCAATGGACTGTACGCCCT
ATTTTTGAAGGCACAAAACCGATTACTTCCGCGCCCGCCATTTCCCAACTGAAAGACAAACGCGTGGTCATCTTCGGCAC
GGGCAGCGATTTGAGTGAGGATGATGTTGATAAAATGGACGAACAATATATTTACGGTATCTTCGACGACGATACGGAGA
CGACGGGTAATGTAAAGGTAGACCTTAAAGGTTTGGGAGGCGGGCTGCTCGAGCAACACCTTACTCAGGAAGATAAAACC
TTATTCCTGACCGATTATAAGCGATCCGACGGCTCGGGCAATAAGGGCTGGGTAGTGAAATTGAAGGACGGACAGCGCGT
TACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTTGTAACCATCCATAAATATACGGGTAATGACAAATGCGGCGCGG
AAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCAAGCTGACCAAGAAAAGCGCGCGCCCGATTGTGCCGGACGCC
AATACGAAGGTCGCGCAATATTCCGGCGATAAGAAAACTTCCAGCGGCAAATCCATCCCTATAGGTTGTATGCAAAAAGG
CAATGAAATCGTCTGCCCGAACGGATATGTTTACGACAAACCGGTTAATGTGCGTTATCTGGATGAAAAGAAAACAGACG
GATTTTCAACAACGGCAGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGCCGGCAAGCGTTCCGGCAAAAACAACCGC
TGCTTCTCCCAAAAAGGGGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGACATTACCGGCCCGACGTGCGGTAT
GAAACGAATCAGCTGGCGTGAAATCTTCTACTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (468-804)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	79.403	100	0.8