Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BFM96_RS04915 Genome accession   NZ_CP016953
Coordinates   1035784..1037532 (+) Length   582 a.a.
NCBI ID   WP_068991084.1    Uniprot ID   A0A917AAU1
Organism   Streptococcus himalayensis strain HTS2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1030784..1042532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFM96_RS04895 scrK 1031968..1032873 (+) 906 WP_068991071.1 fructokinase ScrK -
  BFM96_RS04900 - 1032946..1033356 (+) 411 WP_068991075.1 peptide deformylase -
  BFM96_RS04905 - 1033579..1034031 (+) 453 WP_068991078.1 MarR family winged helix-turn-helix transcriptional regulator -
  BFM96_RS04910 rcrP 1034028..1035794 (+) 1767 WP_068991081.1 ABC transporter ATP-binding protein Regulator
  BFM96_RS04915 rcrQ 1035784..1037532 (+) 1749 WP_068991084.1 ABC transporter ATP-binding protein Regulator
  BFM96_RS04920 pbp1a 1038261..1040417 (-) 2157 WP_068994193.1 penicillin-binding protein PBP1A -
  BFM96_RS04925 recU 1040410..1041012 (-) 603 WP_068991087.1 Holliday junction resolvase RecU -
  BFM96_RS04930 - 1041080..1041601 (+) 522 WP_068991088.1 DUF1273 domain-containing protein -
  BFM96_RS04935 gpsB 1041677..1042009 (+) 333 WP_068991091.1 cell division regulator GpsB -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 63755.84 Da        Isoelectric Point: 6.6984

>NTDB_id=194030 BFM96_RS04915 WP_068991084.1 1035784..1037532(+) (rcrQ) [Streptococcus himalayensis strain HTS2]
MENKQTSLLNQMKPYTKGFQVPFVVAVIGAIISSIITVIGPDKLSEITDLITKGLMTGIDTDKVSEIAMTLAILYGIGAV
VNYAQAFTISTIVQHFSKRLRTAIAEKINKLPLRYFDSHSQGDTLSRVTNDVDTASQSLNQSLGTVLSSSILLVAALIMM
FKTNVTLSFVTIASVLFGFVFVGIIMGRAKGFFKSQQTNLANVNGYVEEMYSGHSVVASYHAGRTVKGQFEMLNQALYGS
MWKSQFISGIMMPMMMFIGNFGYVMVVVTGAALTLNGHATMGTIVAFMVYVRIFSQPLSQIAQGLTVLQSASAAMGRVFE
FLGEPEMEVDSYKGQQLRAVKGDVTFEHVSFGYSADKTIIHDFSATAKAGQKIAIVGPTGAGKTTIVNLLMKFYDIDQGR
ILIDGIDTKNMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQSHVSDEAVIEAAKAVGVHHFIMTLPKGYDTLLDDTVTL
SVGQKQLLTIARALLKNAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HDALMAQNGFYANLYNSQFVEE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=194030 BFM96_RS04915 WP_068991084.1 1035784..1037532(+) (rcrQ) [Streptococcus himalayensis strain HTS2]
ATGGAAAATAAACAAACTTCTTTATTGAACCAGATGAAGCCCTATACCAAAGGATTCCAAGTTCCTTTTGTCGTTGCGGT
GATTGGAGCGATTATCTCAAGCATTATCACGGTAATTGGTCCTGATAAACTTAGCGAGATTACAGACTTGATTACCAAGG
GCTTGATGACGGGAATTGATACGGATAAGGTGTCAGAAATTGCAATGACCCTAGCTATTTTGTACGGAATTGGAGCGGTG
GTTAACTACGCTCAAGCCTTTACCATTTCAACAATTGTTCAGCATTTTTCAAAACGGTTGCGGACGGCGATTGCAGAAAA
AATCAATAAGCTTCCTCTCCGTTATTTTGATAGTCATTCGCAAGGGGATACCTTATCTCGTGTCACCAATGATGTGGATA
CGGCTAGCCAATCCCTCAACCAAAGTTTGGGGACGGTTCTTTCTTCTAGTATTCTCTTGGTAGCAGCCCTCATTATGATG
TTTAAAACCAATGTGACCTTATCCTTTGTCACCATTGCTTCTGTCTTGTTTGGCTTTGTCTTTGTTGGTATTATCATGGG
GCGTGCAAAGGGCTTCTTCAAAAGTCAGCAGACCAATCTTGCTAATGTAAATGGCTATGTAGAAGAAATGTACTCTGGAC
ATTCGGTGGTTGCTAGCTATCATGCGGGTCGTACTGTAAAAGGGCAGTTTGAAATGCTCAACCAAGCACTCTACGGCAGC
ATGTGGAAATCTCAGTTTATTTCTGGGATTATGATGCCCATGATGATGTTTATTGGGAACTTTGGTTATGTCATGGTTGT
GGTAACAGGAGCAGCCTTGACACTAAATGGTCATGCAACCATGGGAACGATTGTGGCCTTTATGGTCTATGTCCGGATTT
TCTCTCAGCCTCTTTCTCAGATTGCCCAAGGTTTGACAGTCTTACAATCAGCTAGCGCTGCGATGGGTCGTGTGTTTGAA
TTCTTGGGTGAGCCTGAAATGGAGGTGGACAGTTATAAGGGACAACAGCTCAGGGCAGTAAAAGGCGATGTCACATTTGA
GCACGTTTCGTTTGGCTATTCTGCTGATAAGACCATTATCCATGACTTCTCCGCAACAGCTAAGGCTGGGCAAAAAATTG
CCATTGTGGGACCAACAGGAGCTGGAAAGACGACCATTGTCAATCTCTTGATGAAGTTCTATGACATTGATCAAGGCCGT
ATTTTGATTGACGGGATTGATACCAAAAATATGAAACGTTCTGAAGTTCATGATGCCTTTAGTATGGTCTTGCAAGATAC
CTGGCTCTTTGAGGGAACGATTAAGGAAAATCTGATTTACAACCAAAGCCATGTTTCAGATGAAGCGGTTATCGAAGCAG
CCAAAGCAGTCGGAGTTCACCATTTTATCATGACCTTGCCGAAAGGCTACGATACCCTGCTAGATGATACGGTAACCTTA
TCTGTTGGGCAAAAACAGTTGCTAACCATTGCACGTGCCTTGTTGAAAAATGCTCCCCTTCTGATCCTTGATGAGGCAAC
CAGCTCTGTTGATACACGGACAGAGGAATTGATTCAGAAGGCAATGGATAAACTGATGGAAGGCCGTACGTCCTTTGTCA
TCGCTCACCGTCTATCCACTATCCGAAATGCGGATCTCATCTTAGTCATGAAAGACGGCAATATCATTGAACAAGGCAAT
CATGATGCTCTGATGGCACAAAATGGATTCTATGCCAACCTTTACAACAGCCAGTTTGTCGAGGAGTAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

70.962

100

0.71

Multiple sequence alignment