Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   BFM96_RS04910 Genome accession   NZ_CP016953
Coordinates   1034028..1035794 (+) Length   588 a.a.
NCBI ID   WP_068991081.1    Uniprot ID   A0A917A992
Organism   Streptococcus himalayensis strain HTS2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1029028..1040794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFM96_RS04890 - 1029955..1031850 (+) 1896 WP_068991068.1 sucrose-specific PTS transporter subunit IIBC -
  BFM96_RS04895 scrK 1031968..1032873 (+) 906 WP_068991071.1 fructokinase ScrK -
  BFM96_RS04900 - 1032946..1033356 (+) 411 WP_068991075.1 peptide deformylase -
  BFM96_RS04905 - 1033579..1034031 (+) 453 WP_068991078.1 MarR family winged helix-turn-helix transcriptional regulator -
  BFM96_RS04910 rcrP 1034028..1035794 (+) 1767 WP_068991081.1 ABC transporter ATP-binding protein Regulator
  BFM96_RS04915 rcrQ 1035784..1037532 (+) 1749 WP_068991084.1 ABC transporter ATP-binding protein Regulator
  BFM96_RS04920 pbp1a 1038261..1040417 (-) 2157 WP_068994193.1 penicillin-binding protein PBP1A -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65588.03 Da        Isoelectric Point: 5.6158

>NTDB_id=194029 BFM96_RS04910 WP_068991081.1 1034028..1035794(+) (rcrP) [Streptococcus himalayensis strain HTS2]
MSKLFKRLNRKEWLMILASIAFVCLTVWLELEVPSYMSEITKLLQLPDTTTSDLWEPGLKMLGLSLASFASSVMVGFMAS
RLAAGFTTRLRKDIFHRVLDYSDAEIKRFSIPSLLTRTTNDLTQIQLLFTMGLQVATRGPIMAIWALSKIVGKSNHWLWA
VLVAVLINLIMMVSLVTLAFPKQTIVQRLTDKLNSITRESLSGIRVVRAYNAEAYQNEKFAQANQELTGINLFVSRMMAL
MQPVMMTISSGLSLAIYWIGAYLINEAELMDKLPIFSDMVVFMSYAMQVVMGFMMMSALFIILPRVLVSTKRINEVLELT
SSITSPQVSQVGQENVDQIVFENVTFRYSDTSEAVIEQINFTAKAGDTVAFIGSTGSGKSTLVNLLPRFYDASEGRILLD
GVDVRDYSEADLHAKVGYIPQKAVLFSGDIRSNIDFGESKESPLSDQAIWEALDLAQAKSFVEEKEDGLSSHVAQSGSNF
SGGQRQRLAIARALARKPEILIFDDSFSALDYRTDRTLREELAKRTAGMTKLIVAQRISTIMDADQILVLDNGKVVGQGT
HKELLAQNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=194029 BFM96_RS04910 WP_068991081.1 1034028..1035794(+) (rcrP) [Streptococcus himalayensis strain HTS2]
ATGAGTAAACTATTTAAACGCTTAAATAGAAAAGAGTGGTTGATGATTTTGGCCAGTATTGCTTTTGTGTGCTTGACCGT
CTGGTTGGAATTAGAAGTGCCGAGCTATATGTCAGAAATCACCAAACTTTTGCAATTACCAGATACGACTACTTCGGACC
TCTGGGAACCGGGCTTAAAAATGTTGGGTTTGTCCTTGGCTAGCTTTGCCAGTTCAGTCATGGTGGGCTTTATGGCTTCG
CGTTTAGCAGCAGGATTTACAACCCGTTTGCGGAAGGATATTTTCCACCGTGTCTTGGATTATTCAGATGCAGAAATCAA
GCGGTTTAGCATTCCTAGTTTACTGACACGGACAACGAATGACCTTACCCAGATTCAGCTTCTATTTACCATGGGCTTGC
AGGTGGCGACTCGTGGGCCGATTATGGCGATTTGGGCCTTGAGCAAGATTGTTGGGAAATCCAATCATTGGTTGTGGGCA
GTGCTTGTGGCAGTTTTGATCAATCTTATCATGATGGTCTCGCTTGTTACTCTCGCTTTTCCCAAGCAGACAATCGTTCA
AAGATTAACGGATAAGCTCAATAGTATTACTCGCGAAAGTTTATCTGGTATTCGGGTTGTCCGTGCTTACAATGCTGAAG
CCTATCAGAATGAAAAATTTGCTCAAGCAAATCAGGAGTTGACAGGGATCAATCTATTTGTCAGTCGAATGATGGCTCTC
ATGCAACCTGTTATGATGACAATTTCGAGTGGCTTGAGTTTGGCTATTTATTGGATTGGAGCCTATCTTATCAATGAAGC
AGAGTTGATGGACAAATTGCCTATTTTTAGCGATATGGTCGTTTTTATGTCCTATGCCATGCAGGTTGTCATGGGCTTTA
TGATGATGAGTGCCTTGTTTATCATTTTGCCTCGTGTCTTGGTATCGACCAAGCGGATTAACGAGGTCTTGGAGTTGACA
TCTTCCATTACTTCGCCTCAAGTGTCGCAAGTGGGACAAGAAAATGTAGACCAAATTGTCTTTGAAAATGTAACCTTCCG
CTATTCTGATACGTCAGAGGCGGTTATTGAGCAGATTAACTTTACCGCCAAAGCAGGTGATACGGTGGCCTTCATTGGCT
CAACAGGTTCTGGAAAATCAACCTTAGTCAATCTGCTTCCACGTTTTTATGATGCGAGTGAGGGGCGGATTCTGCTCGAC
GGCGTTGATGTGAGAGACTACAGTGAGGCGGATTTGCATGCCAAAGTCGGCTATATTCCGCAAAAAGCTGTTTTATTCTC
AGGGGATATCCGTAGTAATATCGACTTTGGGGAAAGCAAGGAAAGTCCACTCAGTGATCAAGCGATTTGGGAGGCCTTGG
ATTTGGCACAGGCCAAAAGCTTTGTTGAGGAAAAAGAAGATGGTCTTTCTTCCCACGTTGCCCAGTCTGGAAGCAATTTC
TCAGGTGGTCAGCGTCAGCGCTTAGCTATTGCTCGTGCCCTTGCTCGTAAGCCTGAAATCTTGATTTTTGATGACTCCTT
CTCAGCACTGGACTATCGGACGGATCGTACTCTTCGGGAGGAACTCGCAAAGCGTACTGCTGGTATGACCAAGTTGATTG
TTGCACAGCGGATTTCAACGATTATGGATGCGGATCAAATCTTGGTGCTTGACAACGGAAAAGTAGTCGGTCAAGGAACC
CATAAAGAATTACTTGCACAGAACGAAGTGTATCAAGAAATTGCTTACTCACAATTATCGAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(357-506)

ABC transporter transmembrane region (ABC_membrane)

(20-291)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.167

100

0.696

Multiple sequence alignment