Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   S101441_RS22185 Genome accession   NZ_CP021507
Coordinates   4179675..4180523 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis subsp. subtilis strain SRCM101441     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4174675..4185523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101441_RS22165 (S101441_04482) yyzM 4175952..4176158 (-) 207 WP_003226838.1 DUF951 family protein -
  S101441_RS22170 (S101441_04483) - 4176252..4177268 (-) 1017 WP_010886647.1 membrane protein -
  S101441_RS22175 (S101441_04484) yyaC 4177728..4178345 (+) 618 WP_003243890.1 spore protease YyaC -
  S101441_RS22180 (S101441_04486) - 4178462..4179612 (+) 1151 WP_087614170.1 IS3 family transposase -
  S101441_RS22185 (S101441_04487) spo0J 4179675..4180523 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  S101441_RS22190 (S101441_04488) soj 4180516..4181277 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  S101441_RS22195 (S101441_04489) yyaB 4181525..4181965 (+) 441 WP_014481510.1 PH domain-containing protein -
  S101441_RS22200 (S101441_04490) noc 4182016..4182867 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  S101441_RS22205 (S101441_04491) rsmG 4182989..4183708 (-) 720 WP_069837911.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=193736 S101441_RS22185 WP_003226832.1 4179675..4180523(-) (spo0J) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=193736 S101441_RS22185 WP_003226832.1 4179675..4180523(-) (spo0J) [Bacillus subtilis subsp. subtilis strain SRCM101441]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAATCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAGCGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387