Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   S101441_RS18840 Genome accession   NZ_CP021507
Coordinates   3533673..3534386 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM101441     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3528673..3539386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101441_RS18820 (S101441_03800) ghrB 3528818..3529795 (+) 978 WP_072592561.1 D-glycerate dehydrogenase -
  S101441_RS18825 (S101441_03801) psdB 3529832..3531772 (-) 1941 WP_069837800.1 lantibiotic ABC transporter permease PsdB -
  S101441_RS18830 (S101441_03802) psdA 3531747..3532526 (-) 780 WP_069837801.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  S101441_RS18835 (S101441_03803) psdS 3532609..3533679 (-) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  S101441_RS18840 (S101441_03804) braR 3533673..3534386 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  S101441_RS18845 - 3534533..3534741 (+) 209 Protein_3663 hypothetical protein -
  S101441_RS18850 (S101441_03806) yvcN 3534777..3535541 (-) 765 WP_080480876.1 arylamine N-acetyltransferase -
  S101441_RS18855 (S101441_03807) crh 3535542..3535799 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  S101441_RS18860 (S101441_03808) whiA 3535823..3536773 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  S101441_RS18865 (S101441_03809) mgfK 3536796..3537749 (-) 954 WP_069837939.1 gluconeogenesis morphogenetic factor -
  S101441_RS18870 (S101441_03810) rapZ 3537751..3538638 (-) 888 WP_003243903.1 RNase adapter RapZ -
  S101441_RS18875 (S101441_03811) rppI 3538663..3539139 (-) 477 WP_014481002.1 NUDIX domain-containing protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=193716 S101441_RS18840 WP_014481000.1 3533673..3534386(-) (braR) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=193716 S101441_RS18840 WP_014481000.1 3533673..3534386(-) (braR) [Bacillus subtilis subsp. subtilis strain SRCM101441]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435