Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   S101441_RS16695 Genome accession   NZ_CP021507
Coordinates   3131399..3132262 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis subsp. subtilis strain SRCM101441     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3126399..3137262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101441_RS16660 (S101441_03354) mrpE 3126567..3127043 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  S101441_RS16665 (S101441_03355) mrpF 3127043..3127327 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  S101441_RS16670 (S101441_03356) mnhG 3127311..3127685 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  S101441_RS16675 (S101441_03357) yuxO 3127724..3128104 (-) 381 WP_069837723.1 hotdog fold thioesterase -
  S101441_RS16680 (S101441_03358) comA 3128123..3128767 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  S101441_RS16685 (S101441_03359) comP 3128848..3131160 (-) 2313 WP_014480703.1 sensor histidine kinase Regulator
  S101441_RS16690 (S101441_03360) comX 3131176..3131397 (-) 222 WP_014480704.1 competence pheromone ComX -
  S101441_RS16695 (S101441_03361) comQ 3131399..3132262 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  S101441_RS16700 (S101441_03362) degQ 3132447..3132587 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  S101441_RS22545 (S101441_03363) - 3132809..3132934 (+) 126 WP_003228793.1 hypothetical protein -
  S101441_RS16705 (S101441_03364) - 3133049..3133417 (+) 369 WP_046381300.1 hypothetical protein -
  S101441_RS16710 (S101441_03365) pdeH 3133393..3134622 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  S101441_RS16715 (S101441_03366) pncB 3134758..3136230 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  S101441_RS16720 (S101441_03367) pncA 3136246..3136797 (-) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=193708 S101441_RS16695 WP_014480705.1 3131399..3132262(-) (comQ) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=193708 S101441_RS16695 WP_014480705.1 3131399..3132262(-) (comQ) [Bacillus subtilis subsp. subtilis strain SRCM101441]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains


Predicted by InterProScan.

(45-195)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439


Multiple sequence alignment