Detailed information NTG0193689

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: S101441_RS13795
• Genome accession: NZ_CP021507
• Coordinates: 2569694..2570821 (-)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SRCM101441
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2564694..2575821

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101441_RS23105	-	2564741..2564953 (-)	213	Protein_2663	recombinase family protein	-
S101441_RS13775 (S101441_02775)	fumC	2565172..2566560 (-)	1389	WP_014480325.1	class II fumarate hydratase	-
S101441_RS13780 (S101441_02776)	-	2566727..2567617 (+)	891	WP_014480326.1	LysR family transcriptional regulator	-
S101441_RS13785 (S101441_02777)	-	2568559..2568954 (+)	396	WP_014480327.1	VOC family protein	-
S101441_RS13795 (S101441_02779)	rapC	2569694..2570821 (-)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
S101441_RS23275	-	2571003..2572929 (+)	1927	Protein_2668	T7SS effector LXG polymorphic toxin	-
S101441_RS13805 (S101441_02783)	-	2572943..2573230 (+)	288	WP_014480331.1	hypothetical protein	-
S101441_RS13810 (S101441_02784)	-	2573633..2574073 (+)	441	WP_014480332.1	SMI1/KNR4 family protein	-
S101441_RS13815 (S101441_02785)	-	2574172..2574624 (+)	453	WP_014480333.1	SMI1/KNR4 family protein	-
S101441_RS13820 (S101441_02786)	cdiI	2574721..2575080 (+)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
S101441_RS13825 (S101441_02787)	-	2575152..2575664 (+)	513	WP_014477426.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=193689 S101441_RS13795 WP_014480328.1 2569694..2570821(-) (rapC) [Bacillus subtilis subsp. subtilis strain SRCM101441]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=193689 S101441_RS13795 WP_014480328.1 2569694..2570821(-) (rapC) [Bacillus subtilis subsp. subtilis strain SRCM101441]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397