Detailed information NTG0193609

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BARD7_RS05355
• Genome accession: NZ_CP016913
• Coordinates: 1096217..1097170 (+)
• Length: 317 a.a.
• NCBI ID: WP_013351813.1
• Uniprot ID: A0AAP7TCS7
• Organism: Bacillus amyloliquefaciens strain RD7-7
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1091217..1102170

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BARD7_RS05330 (BARD7_01083)	argF	1093024..1093980 (+)	957	WP_065981158.1	ornithine carbamoyltransferase	-
BARD7_RS05335 (BARD7_01084)	-	1094071..1094250 (+)	180	WP_013351809.1	YjzC family protein	-
BARD7_RS05340 (BARD7_01085)	-	1094291..1094479 (-)	189	WP_013351810.1	YjzD family protein	-
BARD7_RS05345 (BARD7_01086)	-	1094740..1095474 (+)	735	WP_065981159.1	hypothetical protein	-
BARD7_RS05350 (BARD7_01087)	-	1095557..1096123 (+)	567	WP_065981160.1	hypothetical protein	-
BARD7_RS05355 (BARD7_01088)	med	1096217..1097170 (+)	954	WP_013351813.1	BMP family ABC transporter substrate-binding protein	Regulator
BARD7_RS05360 (BARD7_01089)	comZ	1097182..1097373 (+)	192	WP_013351814.1	ComZ family protein	Regulator
BARD7_RS05365 (BARD7_01090)	-	1097404..1097622 (-)	219	WP_013351815.1	hypothetical protein	-
BARD7_RS05370 (BARD7_01091)	-	1097788..1098726 (+)	939	WP_065981161.1	beta-ketoacyl-ACP synthase III	-
BARD7_RS05375 (BARD7_01092)	fabF	1098750..1099988 (+)	1239	WP_065981162.1	beta-ketoacyl-ACP synthase II	-
BARD7_RS05380 (BARD7_01093)	-	1100072..1100857 (+)	786	WP_065981163.1	DUF2268 domain-containing protein	-
BARD7_RS05385 (BARD7_01094)	-	1101031..1102017 (+)	987	WP_065981164.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35342.94 Da
• Isoelectric Point: 4.5494

>NTDB_id=193609 BARD7_RS05355 WP_013351813.1 1096217..1097170(+) (med) [Bacillus amyloliquefaciens strain RD7-7]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
LHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKNDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYENPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSYL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=193609 BARD7_RS05355 WP_013351813.1 1096217..1097170(+) (med) [Bacillus amyloliquefaciens strain RD7-7]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACCTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCTGATGAAGATATTTTAAAAGCGATAGATGAT
TTGCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGATATGGAGTTCGTCGTCGCAAACGGAACGGCGAAAAACGATAATGTCACAAGCGTTCATCTCATGGGAGAAGCGA
TGGGCTTTTTCGGGGGAATGACAGCTGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCGTTCTTATGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAATCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGACAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGTATCTC
GGCAAAAACACGGTGCTGACAAGCACCGTGCAAAATGTAGATAAAGCCTATACATTAATCGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCCTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.549	100	0.785