Detailed information NTG0193591

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: BARD7_RS00250
• Genome accession: NZ_CP016913
• Coordinates: 45645..45935 (-)
• Length: 96 a.a.
• NCBI ID: WP_169510469.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain RD7-7
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 40645..50935

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BARD7_RS00210 (BARD7_00041)	darA	40663..40992 (+)	330	WP_004264734.1	cyclic di-AMP receptor DarA	-
BARD7_RS00215 (BARD7_00042)	-	41005..41445 (+)	441	WP_065980523.1	YaaR family protein	-
BARD7_RS00220 (BARD7_00043)	holB	41457..42446 (+)	990	WP_065980524.1	DNA polymerase III subunit delta'	-
BARD7_RS00225 (BARD7_00044)	ricT	42449..43276 (+)	828	WP_065980525.1	competence/sporulation regulator complex protein RicT	-
BARD7_RS00230 (BARD7_00045)	yabA	43291..43650 (+)	360	WP_013350748.1	replication initiation-control protein YabA	-
BARD7_RS00235 (BARD7_00046)	-	43710..44453 (+)	744	WP_065980526.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
BARD7_RS00240 (BARD7_00047)	-	44440..44739 (+)	300	WP_065980527.1	GIY-YIG nuclease family protein	-
BARD7_RS00245 (BARD7_00048)	rsmI	44714..45595 (+)	882	WP_065980528.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
BARD7_RS00250 (BARD7_00049)	abrB	45645..45935 (-)	291	WP_169510469.1	transition state genes transcriptional regulator AbrB	Regulator
BARD7_RS00255 (BARD7_00050)	metG	46418..48409 (+)	1992	WP_065980529.1	methionine--tRNA ligase	-
BARD7_RS00260 (BARD7_00051)	-	48486..49253 (+)	768	WP_065980530.1	TatD family hydrolase	-
BARD7_RS00265 (BARD7_00052)	-	49388..50707 (+)	1320	WP_115998366.1	G5 and 3D domain-containing protein	-

Sequence

Protein

• Length: 96 a.a.
• Molecular weight: 10753.57 Da
• Isoelectric Point: 6.3482

>NTDB_id=193591 BARD7_RS00250 WP_169510469.1 45645..45935(-) (abrB) [Bacillus amyloliquefaciens strain RD7-7]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK

Nucleotide

• Length: 291 bp

>NTDB_id=193591 BARD7_RS00250 WP_169510469.1 45645..45935(-) (abrB) [Bacillus amyloliquefaciens strain RD7-7]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTAGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTCTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (55-90)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (10-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	97.917	100	0.979