Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   S101267_RS21165 Genome accession   NZ_CP021505
Coordinates   4060586..4061437 (-) Length   283 a.a.
NCBI ID   WP_013354270.1    Uniprot ID   A0A9P1NJW2
Organism   Bacillus amyloliquefaciens strain SRCM101267     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4055586..4066437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101267_RS21140 (S101267_04248) - 4055792..4057795 (-) 2004 WP_013354266.1 molybdopterin-dependent oxidoreductase -
  S101267_RS21145 (S101267_04249) - 4057842..4058048 (-) 207 WP_004392973.1 DUF951 domain-containing protein -
  S101267_RS21150 (S101267_04250) - 4058134..4059138 (-) 1005 WP_041481692.1 membrane protein -
  S101267_RS21155 (S101267_04251) - 4059312..4059722 (+) 411 WP_013354268.1 GNAT family N-acetyltransferase -
  S101267_RS21160 (S101267_04252) yyaC 4059942..4060556 (+) 615 WP_013354269.1 spore protease YyaC -
  S101267_RS21165 (S101267_04253) spo0J 4060586..4061437 (-) 852 WP_013354270.1 ParB/RepB/Spo0J family partition protein Regulator
  S101267_RS21170 (S101267_04254) soj 4061430..4062191 (-) 762 WP_004392964.1 sporulation initiation inhibitor protein Soj -
  S101267_RS21175 (S101267_04255) noc 4062490..4063341 (-) 852 WP_007615083.1 nucleoid occlusion protein -
  S101267_RS21180 (S101267_04256) rsmG 4063463..4064182 (-) 720 WP_013354272.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  S101267_RS21185 (S101267_04257) mnmG 4064196..4066082 (-) 1887 WP_004392959.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -

Sequence

Protein


Download         Length: 283 a.a.        Molecular weight: 32366.34 Da        Isoelectric Point: 8.3472

>NTDB_id=193588 S101267_RS21165 WP_013354270.1 4060586..4061437(-) (spo0J) [Bacillus amyloliquefaciens strain SRCM101267]
MAKGGLGKGINALFNQVDLSEETVEEIKISDLRPNPYQPRKQFDDESLAELKESIIQHGILQPIIVRKSLKGYDIVAGER
RYRAAKLAGKETVPAIVRELSESLMREIALLENLQREDLSPLEEALAYDSLLKHLDITQEQLAKRLGKSRPHIANHLRLL
TLPESIQNLIVEGTLSMGHGRTLLGLKNKNKLEPLVKKVVEEQLNVRQLEQLIQQLNSNVPRETKKKEPVQDVVLKERES
YLQNYFGTTVNIKRQKKKGKIEIEFFSNEDLERILELLSEREA

Nucleotide


Download         Length: 852 bp        

>NTDB_id=193588 S101267_RS21165 WP_013354270.1 4060586..4061437(-) (spo0J) [Bacillus amyloliquefaciens strain SRCM101267]
ATGGCTAAAGGCGGGCTCGGAAAAGGGATTAATGCGTTGTTTAATCAAGTTGATTTGTCTGAAGAGACAGTGGAAGAGAT
TAAGATCAGTGATTTACGCCCCAATCCTTATCAGCCAAGAAAACAATTTGATGATGAGTCATTAGCTGAACTGAAGGAAT
CCATCATTCAGCATGGCATTCTTCAGCCCATTATCGTGAGAAAATCATTGAAGGGCTACGATATTGTAGCCGGCGAACGC
CGTTATCGCGCCGCAAAACTTGCCGGTAAAGAGACAGTGCCGGCTATCGTGCGGGAGTTATCTGAATCGCTGATGCGGGA
AATCGCCCTATTGGAGAACCTTCAGCGGGAAGATTTATCACCGCTTGAAGAAGCTCTTGCATATGATTCACTGCTGAAGC
ATTTGGATATTACGCAGGAACAGCTCGCTAAACGGCTCGGGAAAAGCAGACCTCATATTGCCAACCATTTAAGACTGCTG
ACGCTTCCTGAAAGCATCCAGAACCTCATTGTAGAAGGTACGTTATCCATGGGGCACGGCAGAACCCTGCTCGGTTTGAA
AAATAAAAACAAGCTTGAACCGCTTGTGAAGAAAGTGGTTGAAGAACAGCTTAACGTCCGTCAGCTTGAGCAGCTCATTC
AGCAATTAAACAGTAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTTCAAGATGTTGTGTTAAAAGAGCGGGAATCG
TATTTGCAAAATTACTTCGGAACAACAGTCAATATTAAGAGACAAAAGAAAAAGGGGAAAATTGAGATTGAGTTTTTCTC
AAATGAAGACCTTGAACGTATCCTTGAGCTTTTGTCTGAAAGAGAAGCGTAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(164-215)

ParB/Sulfiredoxin domain (ParB_N)

(25-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9P1NJW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.538

91.873

0.382