Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   BEN76_RS15115 Genome accession   NZ_CP016896
Coordinates   3200467..3202698 (-) Length   743 a.a.
NCBI ID   WP_076033430.1    Uniprot ID   -
Organism   Acinetobacter soli strain GFJ2     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3195467..3207698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN76_RS15090 (BEN76_15090) crcB 3195743..3196123 (+) 381 WP_076033426.1 fluoride efflux transporter CrcB -
  BEN76_RS15095 (BEN76_15095) - 3196120..3196473 (-) 354 WP_076033427.1 chaperone modulator CbpM -
  BEN76_RS15100 (BEN76_15100) - 3196485..3197426 (-) 942 WP_076033428.1 DnaJ C-terminal domain-containing protein -
  BEN76_RS15105 (BEN76_15105) - 3197627..3198502 (-) 876 WP_004943908.1 Hsp33 family molecular chaperone HslO -
  BEN76_RS15110 (BEN76_15110) - 3198553..3200394 (-) 1842 WP_076033429.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  BEN76_RS15115 (BEN76_15115) priA 3200467..3202698 (-) 2232 WP_076033430.1 primosomal protein N' Machinery gene
  BEN76_RS15120 (BEN76_15120) gspF 3202836..3204041 (+) 1206 WP_004932582.1 type II secretion system inner membrane protein GspF -
  BEN76_RS15125 (BEN76_15125) gspG 3204066..3204587 (+) 522 WP_004943896.1 type II secretion system major pseudopilin GspG -
  BEN76_RS15130 (BEN76_15130) - 3204850..3205194 (+) 345 WP_040053947.1 hypothetical protein -
  BEN76_RS15135 (BEN76_15135) lnt 3205235..3206797 (-) 1563 WP_004943891.1 apolipoprotein N-acyltransferase -
  BEN76_RS15140 (BEN76_15140) - 3206794..3207633 (-) 840 WP_004932593.1 HlyC/CorC family transporter -

Sequence

Protein


Download         Length: 743 a.a.        Molecular weight: 84165.31 Da        Isoelectric Point: 8.4747

>NTDB_id=193548 BEN76_RS15115 WP_076033430.1 3200467..3202698(-) (priA) [Acinetobacter soli strain GFJ2]
MHTTPPQPPQDIFRVRVAVPVHLYDTFDYSVSAADYEQAAIGARVLVSFGRQTLVGMITEKLAPDLPLDPRFQLKPIQAL
LDQSPILDQKVLKLLTWSAQYYQFPLGEVIQTALPGLLRQGKDEDILTHIWRIAAHPDPDAKLKRSLKQFEAYQILKLHP
AGTTETILNLSGVDTATLRALQKKELVTCTQEIQDFRPTPVQLAQMPLTANPDQQHAIERVMAHLHAYRAFLLDGLTGSG
KTEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTITRFKSRFHCDVALLHSGLNDSTRLQAWQQAKMGKASIILGTRSAIFT
PLPHLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSIDSYHLVEQNKLELLELNQRAGVALMPKV
HLIDLKVAKKQHGLSQKLIEQIQHTLKRQEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTVHTQPYTYLHCHHCGT
IQRMPEACLACNHPTLKTLGMGTAKVEAHLTELFPEHDVIRVDRDSTSRVGSWQKIYDRIQQNKPMILLGTQMLAKGHHF
PFVTLVAILDIDAGLLSVDVRAPERTAQLIVQVSGRAGRGEHKGEVYLQTLRPDHPMLTTLIEKDYRAVAAEILNERRVA
LLPPYRYSVLIRCESKDREYSQAFLQQAAARFLQQAGSVAEIWGPIPAPMERKAGRYRAHMVILAQDRARLHFFLRSWWA
DTVQQPRQHQLRISIDVDPQEFS

Nucleotide


Download         Length: 2232 bp        

>NTDB_id=193548 BEN76_RS15115 WP_076033430.1 3200467..3202698(-) (priA) [Acinetobacter soli strain GFJ2]
ATGCACACTACGCCACCTCAGCCCCCTCAAGACATTTTCCGTGTTCGTGTGGCCGTTCCTGTGCATTTATACGATACCTT
CGACTATAGCGTAAGCGCAGCAGATTATGAACAGGCAGCGATCGGTGCTCGCGTTTTAGTCTCGTTTGGCCGTCAGACAC
TGGTCGGTATGATTACTGAAAAACTGGCGCCTGATCTGCCGCTCGATCCAAGATTTCAATTAAAACCGATTCAGGCTTTA
CTGGATCAATCACCGATCTTAGACCAGAAAGTTTTAAAATTATTGACATGGTCGGCGCAATATTACCAATTTCCTCTAGG
CGAAGTGATTCAAACGGCATTACCCGGTTTGCTACGTCAAGGCAAGGACGAGGATATCCTGACGCACATCTGGCGCATCG
CGGCGCATCCCGACCCAGACGCAAAACTCAAGCGCTCGCTCAAACAGTTTGAAGCCTATCAAATTCTCAAGCTACATCCA
GCCGGCACCACTGAGACCATTTTAAATTTAAGCGGCGTCGATACCGCGACCCTTCGTGCTTTACAAAAAAAAGAACTGGT
GACTTGCACACAGGAAATCCAAGATTTCCGTCCCACGCCGGTACAATTGGCACAAATGCCATTAACTGCCAACCCTGACC
AGCAGCATGCCATTGAACGCGTTATGGCACATTTGCATGCCTACCGCGCCTTTTTACTCGATGGGCTAACCGGCAGCGGC
AAAACCGAAGTGTATTTGCACATCATGCACGAGGTGCTCAAGCAAGGTAAACAGGTGCTGGTGCTGGTGCCTGAAATTGG
TCTGACACCACAAACCATTACCCGATTCAAATCCCGATTTCACTGTGATGTCGCGTTGCTGCATTCAGGTTTAAACGATT
CCACGCGCTTACAGGCTTGGCAACAGGCCAAAATGGGCAAAGCCTCAATTATTTTGGGCACGCGGTCTGCAATTTTCACC
CCTTTACCGCATTTGGGATTGATCATTTTAGATGAAGAGCATGATCTTTCTTTTAAGCAGCAAGAAGGCTTTCGCTATCA
TGCACGCGATGTGGCACTGTATCGTGCGCATCTGGAAAATTGTCCGATTATTCTTGGCTCTGCCACGCCCAGTATCGACA
GTTATCATCTGGTCGAACAAAACAAACTTGAATTACTTGAGTTAAATCAACGTGCTGGCGTGGCATTAATGCCTAAAGTA
CACCTGATCGACTTAAAAGTAGCCAAAAAGCAGCACGGATTGAGCCAAAAGCTGATCGAGCAAATCCAGCACACCCTCAA
GCGCCAAGAACAAGTCCTGATTTTTTTAAACCGACGTGGCTATGCCCCCGTACTGGTCTGCGAAAGTTGCGGCTGGCAAG
CCAATTGTCCACATTGCGACGCACATTTTACCGTACATACCCAACCCTATACCTACCTGCACTGTCACCACTGTGGCACT
ATTCAGCGCATGCCAGAGGCGTGTTTGGCCTGCAATCACCCGACCTTAAAAACCTTGGGCATGGGCACTGCCAAAGTCGA
AGCGCATTTGACCGAACTCTTTCCTGAGCATGATGTGATTCGGGTTGATCGTGACAGTACCAGCCGAGTCGGCAGCTGGC
AAAAAATTTATGACCGAATCCAGCAAAACAAGCCGATGATCTTACTCGGAACTCAAATGCTGGCCAAAGGTCATCACTTT
CCGTTCGTGACCTTGGTGGCGATTTTAGATATCGATGCCGGCTTACTGAGTGTCGATGTCCGTGCGCCAGAACGCACCGC
TCAATTGATTGTTCAAGTTTCGGGACGGGCTGGTCGCGGTGAACATAAAGGCGAAGTGTATCTACAAACCCTGCGCCCCG
ATCATCCAATGCTAACAACGCTGATTGAAAAAGATTATCGTGCCGTTGCCGCCGAAATACTCAATGAACGTCGAGTGGCG
TTGTTGCCCCCTTATCGCTATAGCGTGTTGATCCGCTGTGAATCCAAAGATCGTGAATACAGTCAGGCGTTTTTACAACA
AGCCGCAGCACGTTTCTTACAACAGGCAGGCAGTGTGGCCGAGATTTGGGGCCCTATTCCCGCGCCAATGGAACGAAAAG
CAGGACGTTATCGGGCACATATGGTGATTTTGGCGCAAGATCGGGCGCGCTTACATTTCTTTTTACGTTCTTGGTGGGCC
GATACCGTACAGCAACCGCGCCAGCATCAATTACGGATTTCGATTGATGTCGATCCGCAAGAATTTAGCTGA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(16-115)

Primosomal protein N C-terminal domain (PriA_C)

(644-739)

Type III restriction enzyme, res subunit (ResIII)

(211-371)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

77.598

99.731

0.774

Multiple sequence alignment