Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | BEN76_RS10075 | Genome accession | NZ_CP016896 |
| Coordinates | 2122439..2122957 (+) | Length | 172 a.a. |
| NCBI ID | WP_076032994.1 | Uniprot ID | A0A1P8EJF5 |
| Organism | Acinetobacter soli strain GFJ2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2117439..2127957
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEN76_RS10060 (BEN76_10060) | - | 2118091..2119116 (+) | 1026 | WP_076032991.1 | class I SAM-dependent methyltransferase | - |
| BEN76_RS10065 (BEN76_10065) | - | 2119126..2120589 (+) | 1464 | WP_076032992.1 | amino acid permease | - |
| BEN76_RS17425 | - | 2120730..2120897 (+) | 168 | WP_004934934.1 | hypothetical protein | - |
| BEN76_RS10070 (BEN76_10070) | omp38 | 2120982..2122052 (-) | 1071 | WP_076032993.1 | outer membrane protein Omp38 | - |
| BEN76_RS10075 (BEN76_10075) | fimT | 2122439..2122957 (+) | 519 | WP_076032994.1 | GspH/FimT family pseudopilin | Machinery gene |
| BEN76_RS10080 (BEN76_10080) | - | 2123072..2124247 (+) | 1176 | WP_004934927.1 | thiolase family protein | - |
| BEN76_RS10085 (BEN76_10085) | - | 2124380..2124826 (+) | 447 | WP_004934924.1 | VOC family protein | - |
| BEN76_RS10090 (BEN76_10090) | - | 2124842..2125159 (-) | 318 | WP_004934921.1 | DMT family transporter | - |
| BEN76_RS10095 (BEN76_10095) | - | 2125304..2126245 (-) | 942 | WP_076032995.1 | hypothetical protein | - |
| BEN76_RS10100 (BEN76_10100) | - | 2126316..2127134 (-) | 819 | WP_076032996.1 | copper resistance protein B | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19521.37 Da Isoelectric Point: 8.8372
>NTDB_id=193520 BEN76_RS10075 WP_076032994.1 2122439..2122957(+) (fimT) [Acinetobacter soli strain GFJ2]
MNNNFLGFSLIEFLVTLTVLSILIGVGVPTYQHVMATQEANHIPRTLTIHIQKAKSDAVLYRHNVVLCPSIDKQTCSDDW
SKGFIVFLDQNRNRQRDLNEDLLSSTDWNTRYGMLSWKGTLQSNHLMFRAASGLPIGSNGSFYYCSQKVSHKRLVISRMG
HFRVETLADCPT
MNNNFLGFSLIEFLVTLTVLSILIGVGVPTYQHVMATQEANHIPRTLTIHIQKAKSDAVLYRHNVVLCPSIDKQTCSDDW
SKGFIVFLDQNRNRQRDLNEDLLSSTDWNTRYGMLSWKGTLQSNHLMFRAASGLPIGSNGSFYYCSQKVSHKRLVISRMG
HFRVETLADCPT
Nucleotide
Download Length: 519 bp
>NTDB_id=193520 BEN76_RS10075 WP_076032994.1 2122439..2122957(+) (fimT) [Acinetobacter soli strain GFJ2]
ATGAATAACAATTTTTTAGGTTTTAGTTTAATTGAATTTCTCGTTACCCTCACGGTTTTAAGCATTTTAATTGGTGTCGG
AGTACCGACTTATCAGCATGTTATGGCGACTCAAGAAGCCAACCACATTCCAAGAACACTCACAATTCACATACAAAAAG
CAAAGTCCGATGCGGTGCTGTATCGTCATAACGTTGTGCTCTGCCCGAGTATAGATAAGCAAACCTGCAGCGACGACTGG
AGCAAGGGCTTTATTGTATTTTTAGATCAAAACCGTAACCGGCAGCGAGATCTCAATGAAGATCTGCTATCGAGTACAGA
CTGGAATACCCGTTATGGCATGCTGTCTTGGAAAGGCACTTTGCAATCTAACCATTTGATGTTTCGGGCCGCAAGTGGCT
TGCCAATCGGATCAAATGGAAGCTTTTATTATTGTTCGCAAAAAGTCAGTCATAAACGTCTGGTGATCAGCCGCATGGGG
CACTTTCGTGTCGAAACCCTTGCCGATTGCCCAACATGA
ATGAATAACAATTTTTTAGGTTTTAGTTTAATTGAATTTCTCGTTACCCTCACGGTTTTAAGCATTTTAATTGGTGTCGG
AGTACCGACTTATCAGCATGTTATGGCGACTCAAGAAGCCAACCACATTCCAAGAACACTCACAATTCACATACAAAAAG
CAAAGTCCGATGCGGTGCTGTATCGTCATAACGTTGTGCTCTGCCCGAGTATAGATAAGCAAACCTGCAGCGACGACTGG
AGCAAGGGCTTTATTGTATTTTTAGATCAAAACCGTAACCGGCAGCGAGATCTCAATGAAGATCTGCTATCGAGTACAGA
CTGGAATACCCGTTATGGCATGCTGTCTTGGAAAGGCACTTTGCAATCTAACCATTTGATGTTTCGGGCCGCAAGTGGCT
TGCCAATCGGATCAAATGGAAGCTTTTATTATTGTTCGCAAAAAGTCAGTCATAAACGTCTGGTGATCAGCCGCATGGGG
CACTTTCGTGTCGAAACCCTTGCCGATTGCCCAACATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
63.529 |
98.837 |
0.628 |