Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   BEN76_RS09625 Genome accession   NZ_CP016896
Coordinates   2019303..2023592 (-) Length   1429 a.a.
NCBI ID   WP_076032953.1    Uniprot ID   A0A1P8EJ78
Organism   Acinetobacter soli strain GFJ2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2014303..2028592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN76_RS09565 (BEN76_09565) - 2014391..2014855 (-) 465 WP_004935204.1 DUF2750 domain-containing protein -
  BEN76_RS09600 (BEN76_09600) elsL 2015814..2016323 (-) 510 WP_076032950.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  BEN76_RS09605 (BEN76_09605) - 2016310..2016723 (-) 414 WP_076032951.1 YbaN family protein -
  BEN76_RS09610 (BEN76_09610) - 2016865..2017734 (+) 870 WP_076032952.1 DUF1853 family protein -
  BEN76_RS09615 (BEN76_09615) - 2017866..2018009 (+) 144 WP_088459345.1 entericidin A/B family lipoprotein -
  BEN76_RS09620 (BEN76_09620) dapE 2018127..2019260 (+) 1134 WP_004935190.1 succinyl-diaminopimelate desuccinylase -
  BEN76_RS09625 (BEN76_09625) chpA 2019303..2023592 (-) 4290 WP_076032953.1 Hpt domain-containing protein Regulator
  BEN76_RS09630 (BEN76_09630) - 2023660..2025114 (-) 1455 WP_076032954.1 hypothetical protein -
  BEN76_RS09635 (BEN76_09635) - 2025159..2025689 (-) 531 WP_004935181.1 chemotaxis protein CheW -
  BEN76_RS09640 (BEN76_09640) - 2025691..2026062 (-) 372 WP_004935180.1 response regulator -
  BEN76_RS09645 (BEN76_09645) pilG 2026089..2026472 (-) 384 WP_025094513.1 twitching motility response regulator PilG Regulator
  BEN76_RS09650 (BEN76_09650) - 2026797..2027354 (+) 558 WP_370685103.1 hypothetical protein -
  BEN76_RS09655 (BEN76_09655) - 2027413..2028519 (+) 1107 WP_076032955.1 efflux RND transporter periplasmic adaptor subunit -

Sequence


Protein


Download         Length: 1429 a.a.        Molecular weight: 162521.73 Da        Isoelectric Point: 4.6558

>NTDB_id=193518 BEN76_RS09625 WP_076032953.1 2019303..2023592(-) (chpA) [Acinetobacter soli strain GFJ2]
MDTALNTRLAALTLPEDQYLDQDQEILDVFIEELEEVFSALERLIQAWHTTPDDQALLQEICRHFNNLKGTGRMVGANAS
SEIAWMVEETLTRILNSILPTTLPIQQYVAQVYRLYQDELIEDFKQRQPHRVDLRPYAFIGSQLQLNLEIEPALMTLLMR
ASQTADELELAPTNSVKLNESIVIFLEEISVYVADIHHFLANSAPSDDDFNRLLRALHTIRGSSSMACIDAIFDASTALE
STIKQRLLQHGALLSTEQALLGQYLEFITQAVHNIQHGLEAKTLQPLLNIFLDQYQLYQHQLESTAAHELQLNGGVVAAL
LALEIDDLLDAEFEFQDRIRHQSVDYIVILQEQAASLYAATDTDRTRVLHIFTQHLQSVYQELIGITSSDFPQSLYDAFQ
PVHTAFVGLFDSLAAAQHISSFTPYQVLFDQLNREIKPFKPLDLEEFASQSVTTQHSDISTDSVLNLDMRLMSYLAEDRQ
LVLAQPLQVDDSLLEIFLEESEELLAGVETELTLWAEAPNNLDILQHLIRFLHTLKGGANMVQLNQIGLIAHELESIYQR
LIYQQLDVSFELIKIIRIVHDDLAERIQNLYQHAVEFPVSHVLDVLQHIEDWLPTAFSEADFTQNQVIKQAGLKLNDQMS
LGEVLAFNSVPAAPETFPQTLVEKMFVDEAQDLLSQAELNLQQWIKERHQRHLLLELQRIFHRLTRSARLLELKYVMDIT
TRLEITFERMNLHNSKTSSYDPLLLNAVQWLRLAIFDTRYDHYHELKHQLEQLELTQPLFPVQFEQIAASLSESGAVSPG
DGTEPPSMHGEWDTSIAVDESNEMIRVSADLIDKMIDQSGENAINRSRIQMDIAQVDTVLGEMELAIQRLSRQLKHLDRV
LDTQSLQQLSGEHTATLEPEQYSNFYHLSKSLAESASDLLDFRTSLTEKIRDTESLLLQQSRIQADLQENLIRTRLVPFS
HLLPRLQRTVRQTALALNRPTQLLVHNTEGELDRSILERLVVPLEHMLRNAIDHGIEDQQTRLSQGKPSIGTIELSIRRH
GTDVVLQLKDDGRGMDSNAIANKAQQLGYLDHFHTLDDDQIFQYIFYPGFSTASAITHISGRGVGLDIVHNEIKALGGKI
TVTAQPGMGTTFSLRVPTTVAVSDALMVKVLDQQYALPLGKIERIVRLSPLILEQYFNSQQDRFELDNTRYKLRYLGEFV
SNVVEPDWSTITGELEVLLIHSSTGPQVALLVDQVVGSRGQIVVKPIGQQFSQVKVVAGASILGDGQVCLILDPITIAEQ
VDQQPRQYRHDTDHERAIREERAMIMVVDDSVTVRKVTSRLLERQGYDVVTAKDGQDALEKLEHIRPDVILLDVEMPRMD
GFEFTRRLRQHNLLQALPIIMISSRTGEKYREMAQQLEVNDYLGKPFQEEQLLAKIQMLLMQATRQTVL

Nucleotide


Download         Length: 4290 bp        

>NTDB_id=193518 BEN76_RS09625 WP_076032953.1 2019303..2023592(-) (chpA) [Acinetobacter soli strain GFJ2]
ATGGACACCGCATTAAATACGCGTCTGGCGGCGCTGACCTTGCCTGAAGATCAATATCTGGATCAGGATCAGGAGATTCT
TGACGTTTTTATTGAAGAGCTCGAAGAGGTGTTTAGTGCATTGGAGCGCCTGATTCAGGCTTGGCATACGACGCCTGACG
ATCAAGCCTTGTTGCAAGAAATCTGTCGGCACTTTAATAATTTAAAAGGTACAGGCCGGATGGTGGGGGCCAATGCGTCG
AGTGAAATTGCATGGATGGTGGAGGAAACCCTCACACGAATTCTCAACTCAATTTTACCTACTACACTCCCGATTCAGCA
GTATGTGGCTCAGGTTTATCGGCTTTATCAAGATGAACTGATTGAGGATTTTAAACAACGCCAGCCACATCGTGTCGATT
TACGGCCCTATGCATTTATTGGGTCACAGTTACAACTCAATCTCGAGATAGAACCTGCGCTGATGACTCTGCTCATGAGA
GCATCTCAGACAGCTGATGAATTGGAACTCGCGCCAACTAACAGCGTCAAACTAAATGAATCTATTGTCATTTTTCTAGA
AGAAATCTCGGTTTATGTTGCAGATATCCATCATTTTTTAGCAAACTCAGCCCCTTCGGATGATGACTTTAACCGACTGT
TACGTGCCTTGCATACCATACGTGGTAGCTCATCCATGGCCTGTATCGATGCGATTTTTGATGCCAGTACAGCACTTGAA
AGCACAATCAAGCAGAGATTACTTCAGCATGGAGCACTACTCTCTACCGAGCAGGCTTTGCTTGGTCAGTATCTGGAATT
TATTACACAGGCGGTGCACAACATTCAGCATGGCTTAGAGGCCAAGACGCTTCAACCACTACTGAATATCTTTTTAGATC
AGTATCAGCTTTATCAGCATCAGCTCGAATCGACTGCTGCACATGAGTTACAGCTCAATGGCGGTGTGGTAGCGGCCTTA
CTCGCACTTGAAATTGATGATTTGCTCGATGCCGAATTTGAGTTTCAAGATCGTATACGGCACCAGTCGGTCGATTATAT
TGTGATTTTACAGGAACAGGCCGCAAGCCTATACGCTGCGACCGATACAGACCGAACACGTGTTTTGCATATTTTTACCC
AGCATTTGCAATCGGTTTATCAAGAACTCATCGGAATCACGAGTAGTGATTTTCCTCAAAGCCTATATGATGCATTCCAG
CCAGTGCATACCGCATTTGTGGGGCTGTTTGATAGTTTGGCTGCGGCACAGCACATTAGTTCTTTTACACCGTATCAGGT
GCTGTTTGATCAGCTCAATCGAGAAATCAAGCCATTTAAGCCGCTTGATTTGGAAGAATTTGCTTCTCAAAGTGTAACGA
CTCAACATAGTGACATCAGTACCGATTCGGTACTTAATCTCGACATGCGACTGATGTCTTATTTGGCAGAAGATCGTCAG
CTTGTGCTGGCACAGCCGTTACAGGTCGATGACAGTTTGCTGGAAATTTTCCTTGAAGAGAGTGAAGAACTACTAGCAGG
CGTCGAAACCGAGCTGACGCTCTGGGCCGAAGCGCCAAATAATTTAGATATCTTGCAACATCTGATCCGGTTTTTGCACA
CCTTAAAAGGGGGTGCCAATATGGTTCAGCTAAATCAGATCGGTTTGATTGCACATGAGCTGGAATCGATTTATCAACGT
CTGATCTATCAGCAATTAGATGTTTCATTCGAACTGATCAAGATCATTCGAATTGTGCATGATGATCTGGCCGAACGGAT
TCAAAACCTGTATCAGCATGCAGTAGAGTTTCCGGTAAGTCATGTCTTGGATGTGCTTCAACATATCGAAGACTGGTTGC
CGACCGCATTCTCTGAAGCGGATTTTACTCAAAATCAAGTAATAAAGCAGGCTGGGTTAAAGCTTAACGATCAGATGAGC
TTGGGTGAAGTACTGGCGTTCAATTCAGTACCCGCCGCCCCTGAGACTTTTCCGCAAACCTTGGTCGAAAAAATGTTTGT
GGATGAAGCACAAGATTTGCTTTCACAGGCCGAACTCAATCTTCAGCAATGGATCAAGGAGCGTCATCAGCGTCATTTGC
TGTTGGAGCTACAACGTATTTTTCATCGCTTAACGCGCAGTGCACGGCTGCTCGAACTCAAATATGTCATGGACATTACC
ACGCGACTTGAGATTACCTTTGAGCGAATGAACCTGCACAATTCTAAAACTAGCAGCTACGATCCATTGCTTCTCAACGC
CGTACAATGGTTGAGACTGGCAATTTTTGATACGCGTTACGATCATTATCACGAACTTAAGCATCAACTTGAGCAGTTAG
AGCTGACCCAACCTTTGTTTCCGGTACAGTTTGAACAGATCGCTGCATCATTGTCCGAATCGGGTGCGGTTAGTCCGGGT
GACGGCACAGAGCCGCCGTCTATGCATGGTGAGTGGGACACTTCCATTGCGGTTGATGAAAGCAATGAAATGATCCGTGT
TTCGGCAGATCTGATTGACAAAATGATTGATCAGTCTGGTGAAAACGCCATCAATCGCTCCCGAATTCAGATGGATATTG
CGCAGGTCGATACCGTTTTGGGTGAAATGGAACTGGCGATTCAGCGTTTATCGCGTCAGCTTAAACATCTGGATCGGGTG
TTAGATACACAATCTTTACAACAACTTTCTGGTGAACATACCGCCACGCTTGAGCCAGAGCAATATTCAAATTTTTATCA
TTTAAGTAAATCCTTGGCAGAATCGGCATCGGATTTACTCGATTTTCGTACCAGTTTGACCGAAAAAATTCGAGATACCG
AAAGTTTACTGCTCCAGCAATCGCGAATTCAGGCCGATCTGCAAGAAAATCTGATTCGTACTCGACTGGTTCCGTTTTCG
CATCTTTTACCACGCTTACAACGCACCGTCCGACAAACTGCTCTGGCGCTGAATCGACCAACTCAACTGCTGGTTCACAA
TACAGAAGGCGAGTTAGATCGGAGTATTCTAGAGCGTTTGGTCGTACCGCTCGAACATATGCTCCGCAATGCCATCGATC
ATGGTATTGAAGATCAGCAAACACGACTGAGCCAAGGTAAACCATCAATCGGGACCATTGAGCTTTCTATCCGCCGTCAT
GGTACTGATGTGGTCTTGCAGTTAAAAGATGATGGTCGAGGCATGGACAGCAATGCAATTGCAAACAAGGCGCAGCAACT
GGGCTATTTAGACCATTTTCATACTCTAGATGACGATCAAATCTTCCAATATATCTTTTACCCGGGGTTTTCAACGGCGT
CTGCAATTACCCATATTTCGGGGCGTGGTGTTGGCCTCGATATTGTGCATAACGAAATCAAGGCGCTCGGAGGTAAAATC
ACCGTGACTGCCCAACCGGGTATGGGAACCACATTTAGCCTGCGTGTGCCCACCACAGTAGCGGTCAGTGATGCGCTGAT
GGTCAAGGTGCTTGATCAGCAATATGCCTTACCACTGGGTAAAATTGAGCGTATTGTGCGCTTATCGCCGCTGATTTTGG
AACAATACTTTAATAGCCAGCAAGATCGTTTTGAGCTTGATAATACCCGCTACAAATTACGTTATCTGGGTGAATTTGTA
AGTAATGTGGTCGAGCCAGACTGGTCAACCATCACAGGTGAGCTGGAGGTGTTGCTGATTCATTCCAGCACAGGGCCGCA
GGTGGCGTTGCTGGTTGATCAGGTGGTCGGATCACGTGGTCAGATTGTGGTGAAACCAATCGGGCAACAGTTTAGTCAGG
TTAAAGTGGTGGCGGGCGCATCGATTTTAGGCGATGGGCAAGTCTGTTTGATCTTAGATCCGATTACCATTGCAGAACAA
GTCGATCAACAGCCACGACAATATCGCCACGATACCGACCACGAGCGCGCTATACGTGAAGAGCGAGCCATGATCATGGT
GGTGGATGATTCAGTGACGGTTCGAAAGGTGACATCACGTTTACTCGAACGCCAAGGGTACGATGTAGTAACAGCCAAAG
ATGGCCAAGATGCGCTAGAGAAGCTGGAGCACATTCGTCCAGATGTCATTTTACTCGACGTTGAGATGCCGCGAATGGAT
GGGTTCGAATTTACCCGTCGTTTACGTCAGCACAATTTACTGCAAGCTTTACCGATTATCATGATCAGCTCACGTACGGG
CGAAAAATACCGCGAGATGGCACAGCAGCTTGAGGTGAACGATTATCTGGGCAAACCTTTTCAAGAGGAACAACTGCTCG
CCAAAATCCAGATGCTGCTCATGCAAGCAACTAGGCAAACCGTTTTATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

45.844

100

0.486


Multiple sequence alignment