Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   BFG52_RS01670 Genome accession   NZ_CP016895
Coordinates   377545..379773 (-) Length   742 a.a.
NCBI ID   WP_067558990.1    Uniprot ID   A0A1B2M451
Organism   Acinetobacter larvae strain BRTC-1     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 372545..384773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BFG52_RS01650 (BFG52_01650) - 372898..373236 (-) 339 WP_067551735.1 chaperone modulator CbpM -
  BFG52_RS01655 (BFG52_01655) - 373249..374199 (-) 951 WP_067551738.1 DnaJ C-terminal domain-containing protein -
  BFG52_RS01660 (BFG52_01660) - 374441..375316 (-) 876 WP_067551741.1 Hsp33 family molecular chaperone HslO -
  BFG52_RS01665 (BFG52_01665) - 375370..377427 (-) 2058 WP_067551744.1 cation:proton antiporter -
  BFG52_RS01670 (BFG52_01670) priA 377545..379773 (-) 2229 WP_067558990.1 primosomal protein N' Machinery gene
  BFG52_RS01680 (BFG52_01680) gspF 380041..381246 (+) 1206 WP_067551749.1 type II secretion system inner membrane protein GspF -
  BFG52_RS01685 (BFG52_01685) gspG 381328..381771 (+) 444 WP_067551752.1 type II secretion system major pseudopilin GspG -
  BFG52_RS01690 (BFG52_01690) - 381858..382604 (+) 747 WP_067551755.1 IS5 family transposase -
  BFG52_RS01695 (BFG52_01695) - 382988..383332 (+) 345 WP_067551758.1 hypothetical protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 83828.22 Da        Isoelectric Point: 9.2523

>NTDB_id=193490 BFG52_RS01670 WP_067558990.1 377545..379773(-) (priA) [Acinetobacter larvae strain BRTC-1]
MTLDASQTTSLPYRIRVAVPVPLYDSFDYALTAEQYAIAQIGARVAVPFGRQKLVGIIVEKLAPDSALNPNFQIKFIHAL
LDQQPILEPIVLSLLTWAAQYYQFPIGEVMHSALPSLLRQGKPYDLLARVWRLLDLDAEAQLKRSEKQQQAYKILKLHPQ
GTAETILNLSGIDNNVLKALAKKGIARCDLETQDFRPEPVQLAQMPLTANADQKHAIQQILKALQRYQGFLLDGLTGSGK
TEVYLQVMHQVLKQGKQVLVLVPEIGLTPQTISRFQSRFHGHIALLHSGLTENKRLQAWQAAQTGKASIILGTRSAILAP
MANLGLIILDEEHDLSYKQQEGFRYHARDVALYRAALLRCPIILGSATPSIESYHLVAQAKLSCLQLNQRAGIASMPKMH
VIDLTVARKQHGLSEQLLTEMRKRLAENEQVLLFLNRRGYAPVLLCENCAWQAQCPHCDANLTLHVQPYQHLHCHHCGTI
QSMPQHCPKCQHQPLKPIGLGTAKIENVLQTLFSDVPIIRVDRDSTSKVGSWHKIHEQIHKSEASILLGTQMLAKGHHFP
YVTLVAILDIDAGLLSVDFRAPERTAQLIIQVAGRSGRGEKKGEVYLQTYRPDHPLFQTLLKHDYRCFAQETLAQRQLAQ
LPPFRYAILLRAESRHQDYNQQFLSQMRDLLLQQAEENLITVWGPIPAAMERKAGRFQAHMVLLSHDRPRLHFYVRQWWP
QLLKAKTADLRISIDVDPQELS

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=193490 BFG52_RS01670 WP_067558990.1 377545..379773(-) (priA) [Acinetobacter larvae strain BRTC-1]
ATGACGCTAGACGCTTCCCAAACAACAAGCTTGCCTTATCGCATTCGCGTTGCTGTGCCGGTTCCTTTATACGACAGTTT
TGATTATGCACTCACAGCTGAACAGTATGCCATTGCACAGATTGGTGCGCGTGTAGCAGTCCCTTTTGGTCGACAAAAAC
TGGTCGGCATTATTGTCGAAAAACTGGCACCTGATAGTGCACTTAACCCAAATTTTCAAATTAAATTTATCCATGCATTA
TTAGATCAGCAACCGATTCTAGAGCCGATAGTTTTAAGTTTATTGACATGGGCGGCACAATATTACCAATTCCCAATCGG
TGAGGTCATGCACAGCGCCCTCCCCAGCCTGCTGCGCCAAGGCAAGCCCTATGATTTATTGGCACGTGTCTGGCGTTTGC
TCGACCTAGATGCCGAAGCACAACTGAAACGCTCTGAAAAACAGCAACAAGCCTATAAAATTCTCAAACTCCATCCGCAA
GGTACGGCAGAAACTATTCTCAACTTAAGTGGCATAGACAACAATGTACTCAAAGCCTTGGCAAAAAAAGGCATTGCACG
TTGTGACCTAGAAACACAAGACTTTCGCCCAGAACCGGTACAACTGGCACAAATGCCTTTGACCGCCAATGCCGATCAAA
AACATGCCATCCAACAGATTCTGAAAGCCTTACAGCGTTATCAAGGTTTTTTATTAGATGGCTTAACTGGGAGTGGTAAA
ACCGAAGTCTATCTGCAAGTCATGCACCAGGTCCTCAAACAAGGTAAACAAGTCTTGGTTTTGGTTCCTGAAATTGGTTT
AACCCCTCAGACCATCAGCCGTTTTCAATCGCGCTTTCATGGGCATATTGCGTTATTGCATTCGGGTTTAACGGAAAATA
AACGTCTGCAAGCATGGCAAGCCGCACAAACAGGTAAGGCATCGATTATTTTGGGTACCCGTTCTGCCATCTTGGCGCCC
ATGGCCAATTTGGGGTTGATTATTCTTGATGAAGAACATGATCTCTCTTATAAACAACAAGAAGGCTTTCGTTATCATGC
CCGTGATGTAGCGCTTTATCGTGCAGCATTATTGCGTTGCCCTATTATTTTAGGTTCCGCTACGCCCAGTATTGAAAGCT
ATCATTTGGTTGCACAAGCTAAACTGAGCTGTTTACAGCTCAATCAACGTGCTGGCATTGCCAGCATGCCGAAAATGCAT
GTCATCGATTTGACGGTTGCCAGAAAACAGCATGGGCTCAGTGAACAACTGCTGACAGAAATGCGCAAGCGTTTGGCAGA
GAATGAACAGGTTTTATTATTTTTAAATCGTCGTGGTTATGCCCCCGTCTTACTCTGTGAAAATTGTGCATGGCAAGCGC
AATGCCCACATTGCGATGCCAATCTAACCCTACATGTACAGCCTTATCAGCATTTACATTGTCACCACTGCGGGACCATC
CAAAGCATGCCGCAGCATTGCCCCAAATGCCAACATCAGCCGCTAAAACCGATTGGACTTGGGACTGCCAAAATTGAAAA
TGTCTTACAAACACTATTTAGTGATGTCCCAATCATTCGGGTTGATCGCGACTCCACCAGCAAAGTGGGCAGTTGGCATA
AAATTCATGAACAAATTCATAAGAGTGAAGCCAGTATTTTGCTGGGCACACAAATGCTCGCCAAAGGGCATCATTTTCCT
TATGTGACTTTAGTGGCCATTTTAGACATCGATGCCGGACTACTCAGCGTAGACTTTCGTGCACCTGAACGGACCGCACA
ACTGATTATTCAAGTGGCAGGACGTTCAGGACGTGGTGAGAAAAAAGGCGAGGTGTATCTACAGACTTATCGGCCTGATC
ACCCCTTATTTCAAACATTGCTAAAACATGACTATCGCTGCTTTGCGCAAGAGACTTTGGCGCAGCGGCAACTGGCACAA
CTGCCCCCCTTTCGTTATGCCATTTTACTGCGTGCCGAATCGCGTCACCAAGACTATAACCAGCAATTTCTCAGTCAAAT
GCGTGACCTGCTCTTACAACAAGCGGAAGAAAATCTAATCACGGTTTGGGGGCCAATTCCTGCGGCAATGGAGCGCAAAG
CTGGGCGTTTTCAGGCACATATGGTCTTGCTCAGTCATGATCGACCACGCTTGCATTTTTATGTACGACAGTGGTGGCCA
CAATTACTCAAAGCCAAAACTGCGGATCTCCGCATCAGTATTGATGTCGATCCACAAGAATTAAGCTGA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

3DNA-binding domain (3BD) (PriA_3primeBD)

(16-115)

Type III restriction enzyme, res subunit (ResIII)

(210-370)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1B2M451

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

68.299

99.057

0.677

Multiple sequence alignment