Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | BSHJ0_RS13370 | Genome accession | NZ_CP016894 |
| Coordinates | 2549451..2550488 (-) | Length | 345 a.a. |
| NCBI ID | WP_029726718.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain HJ0-6 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2544451..2555488
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSHJ0_RS13320 (BSHJ0_02620) | tasA | 2544549..2545334 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| BSHJ0_RS13325 (BSHJ0_02621) | sipW | 2545398..2545970 (-) | 573 | WP_072692741.1 | signal peptidase I SipW | - |
| BSHJ0_RS13330 (BSHJ0_02622) | tapA | 2545954..2546715 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BSHJ0_RS13335 (BSHJ0_02623) | yqzG | 2546986..2547312 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| BSHJ0_RS13340 (BSHJ0_02624) | spoIITA | 2547354..2547533 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| BSHJ0_RS13345 (BSHJ0_02625) | comGG | 2547605..2547979 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| BSHJ0_RS13350 (BSHJ0_02626) | comGF | 2547980..2548363 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| BSHJ0_RS13355 (BSHJ0_02627) | comGE | 2548389..2548736 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| BSHJ0_RS13360 (BSHJ0_02628) | comGD | 2548720..2549151 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| BSHJ0_RS13365 (BSHJ0_02629) | comGC | 2549141..2549437 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| BSHJ0_RS13370 (BSHJ0_02630) | comGB | 2549451..2550488 (-) | 1038 | WP_029726718.1 | comG operon protein ComGB | Machinery gene |
| BSHJ0_RS13375 (BSHJ0_02631) | comGA | 2550475..2551545 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| BSHJ0_RS13385 (BSHJ0_02633) | - | 2551758..2551955 (-) | 198 | WP_029726717.1 | hypothetical protein | - |
| BSHJ0_RS13390 (BSHJ0_02634) | corA | 2551957..2552910 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| BSHJ0_RS13395 (BSHJ0_02635) | yqhB | 2553053..2554381 (+) | 1329 | WP_029726716.1 | hemolysin family protein | - |
| BSHJ0_RS13400 (BSHJ0_02636) | rsbRD | 2554434..2555270 (-) | 837 | WP_003230149.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39702.10 Da Isoelectric Point: 9.6257
>NTDB_id=193456 BSHJ0_RS13370 WP_029726718.1 2549451..2550488(-) (comGB) [Bacillus subtilis strain HJ0-6]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDILFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=193456 BSHJ0_RS13370 WP_029726718.1 2549451..2550488(-) (comGB) [Bacillus subtilis strain HJ0-6]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATACTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |