Detailed information NTG0193445

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BSHJ0_RS09330
• Genome accession: NZ_CP016894
• Coordinates: 1837974..1839110 (-)
• Length: 378 a.a.
• NCBI ID: WP_068947494.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain HJ0-6
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1832974..1844110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSHJ0_RS09300 (BSHJ0_01819)	-	1833381..1833839 (+)	459	WP_032721596.1	YrhA family protein	-
BSHJ0_RS09305 (BSHJ0_01820)	-	1833895..1834476 (+)	582	WP_032721598.1	SMI1/KNR4 family protein	-
BSHJ0_RS22735	-	1834781..1834870 (-)	90	WP_072692678.1	putative holin-like toxin	-
BSHJ0_RS09310 (BSHJ0_01821)	-	1835026..1836024 (-)	999	WP_068947491.1	hypothetical protein	-
BSHJ0_RS09315 (BSHJ0_01822)	yolD	1836192..1836524 (+)	333	WP_041336419.1	YolD-like family protein	-
BSHJ0_RS09320 (BSHJ0_01823)	-	1836517..1837767 (+)	1251	WP_068947492.1	DNA polymerase thumb domain-containing protein	-
BSHJ0_RS09325 (BSHJ0_01824)	-	1837808..1837984 (-)	177	WP_068947493.1	aspartate phosphatase	-
BSHJ0_RS09330 (BSHJ0_01825)	rapC	1837974..1839110 (-)	1137	WP_068947494.1	Rap family tetratricopeptide repeat protein	Regulator
BSHJ0_RS09335 (BSHJ0_01826)	-	1839238..1839489 (-)	252	WP_017696899.1	phage holin	-
BSHJ0_RS09340 (BSHJ0_01827)	-	1839510..1839902 (-)	393	WP_017696898.1	hypothetical protein	-
BSHJ0_RS09345 (BSHJ0_01828)	blyA	1840019..1841122 (-)	1104	WP_068947495.1	N-acetylmuramoyl-L-alanine amidase BlyA	-
BSHJ0_RS09350 (BSHJ0_01829)	-	1841300..1843534 (-)	2235	WP_068947496.1	tail fiber domain-containing protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44847.08 Da
• Isoelectric Point: 5.0660

>NTDB_id=193445 BSHJ0_RS09330 WP_068947494.1 1837974..1839110(-) (rapC) [Bacillus subtilis strain HJ0-6]
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEVEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTLNEERPKIS
DLLEKIESSQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMDYPEKAIPHFKDALDKAREIDMSRLIGSSLYNLGLCSFAEEAYEKAS
EYFKEGIRVYQDNGYEHSNRILDILLMLTKTTFKMRNHSEGISWCAHGLSLSKNLNDEIMAKMFEFIHALYVDNDNEKLN
SILNYLELKSMLSDVEDLASDAAKYYNEKEDHKVAVAYYEKVLYARKQIQRGDCLYET

Nucleotide

• Length: 1137 bp

>NTDB_id=193445 BSHJ0_RS09330 WP_068947494.1 1837974..1839110(-) (rapC) [Bacillus subtilis strain HJ0-6]
TTGGAGCAGATGATCTCTTCTTCTAAAGTTGGAGTGAAAATAAATGAGTGGTATAAATACATAAGATTATTTAGTGTCCC
AGATTCGGAAATATTGAAAGCTGAGGTCGAGGAAGAAATAAGGCATATGAAAGAAGATCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAGCTGATGCTGGACTACCTTGAACCAAAAACATTGAACGAAGAACGACCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGTAGTCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAACTTTTTCCGGGGAAT
GTATGAATTTGAACAATACGAATATCTTAATGCCATAAGCTTCTATAAGCAAGCCGAGAGAAAATTATCACTTGTTGCAG
ATGAAATTGAAAGAGCTGAATTCCACTATAAAGTTGCAGAAATTTATTATCATATGAAGCAAACACATATGTCGATGCAC
CACATTGTTCAAGCAATCGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTTATCGG
ACTGAACTATTTGGATATGGACTACCCTGAAAAAGCGATCCCTCATTTTAAAGATGCTCTAGATAAAGCAAGAGAAATCG
ATATGTCACGATTAATCGGATCATCTCTTTACAATCTCGGCTTATGTTCCTTTGCTGAGGAAGCTTATGAAAAGGCATCT
GAGTACTTCAAGGAGGGCATTAGAGTATATCAGGATAATGGGTATGAACATTCAAATCGCATATTAGATATCTTACTTAT
GTTGACAAAAACCACTTTTAAAATGAGAAATCACTCCGAGGGAATTTCTTGGTGTGCACACGGTCTGTCTTTGTCCAAAA
ATTTAAACGATGAGATTATGGCAAAAATGTTTGAATTCATTCATGCCTTATATGTAGATAATGACAATGAAAAATTAAAT
TCAATTCTAAATTATTTAGAATTAAAGTCAATGCTTTCAGACGTGGAGGATTTAGCATCAGATGCAGCGAAGTATTACAA
TGAAAAAGAAGACCATAAAGTGGCTGTTGCTTATTATGAAAAAGTGCTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (343-367)

• Tetratricopeptide repeat (TPR_8) (222-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.031	100	0.484
rapF	Bacillus subtilis subsp. subtilis str. 168	45.789	100	0.46